Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00239 ATGAGGACAGTGTACAGCAAGGATGGGAATCTCACAAATTTACGGTTTTGCCACTGTTCCCAAGTTCGCACCCTTACCCCAAAATCCTCATTCCTCGTTTCTCTCATTCAAGTTCCAAACTTTACCCTCTCCATCACAACAAAAACCTTTCCCTTTCGATCTTCCTCCATTCTCTGCGGAATCAACCGTCGATGTGTGAATAATAATTATCGTCGTTGGGTGATTCGAGCATCAATGGCATCTTCCACGTCATCCCCAACACAGAGAGAGCGATTCTCTGTGCTGTTTGTGTGCCTCGGCAACATATGCAGAAGCCCAGCTGCGGAAGGAGTATTCCAGGACTTGGTTAAGAAAAGGGGTCTCGATTCAAAGTTCAACATCGATTCTTGTGGCACCATCGATTATCACGAGGGGAATGAAGCGGATCCGAGGATGAGGGAAGCATCAAAGAAGCGTGGGATTCAGATAACTTCAATTTCGAGACCGATCAAGCCATCTGATTTCGTTGATTTTGATCTTATTCTAGCCATGGACATGCAAAACAGAGAGGACATATTGGAGTCTTTCAATAGTTGGAGAGCCAGATATAAGTTACCAGATGATGCACATAAAAAGGTTAAGTTGATGTGCTCCTATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCTTATTATGGTGGACCGCAAGGGTTTGAGAAGGTATTAGATTTGCTTGAAGATGCTTGCGGATCATTGCTGGAAAATATTTTGGCTGAAAATGAACATGTACGACAATCCTAA 783 0.4368 MRTVYSKDGNLTNLRFCHCSQVRTLTPKSSFLVSLIQVPNFTLSITTKTFPFRSSSILCGINRRCVNNNYRRWVIRASMASSTSSPTQRERFSVLFVCLGNICRSPAAEGVFQDLVKKRGLDSKFNIDSCGTIDYHEGNEADPRMREASKKRGIQITSISRPIKPSDFVDFDLILAMDMQNREDILESFNSWRARYKLPDDAHKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLENILAENEHVRQS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00239 260 PRINTS LMW phosphotyrosine protein phosphatase signature 94 111 IPR017867 GO:0004725|GO:0006470
Aip03g00239 260 PRINTS LMW phosphotyrosine protein phosphatase signature 137 153 IPR017867 GO:0004725|GO:0006470
Aip03g00239 260 PRINTS LMW phosphotyrosine protein phosphatase signature 221 236 IPR017867 GO:0004725|GO:0006470
Aip03g00239 260 SMART LMWPc_2 92 249 IPR023485 -
Aip03g00239 260 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 70 255 - -
Aip03g00239 260 Gene3D - 75 255 - -
Aip03g00239 260 CDD LMWPTP 93 248 - -
Aip03g00239 260 Pfam Low molecular weight phosphotyrosine protein phosphatase 94 247 IPR023485 -
Aip03g00239 260 SUPERFAMILY Phosphotyrosine protein phosphatases I 91 250 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00239 35 254 Protein tyrosine phosphatase (PTP) family AT3G44620 55.133 2.67e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00239 K25307 - gmx:100797254 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00239 03 2383829 2386217 Aip03g00239 03 2383829 2386217 ECH