Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00235 ATGGAGATGCTGCATATCATGACTACTTCAGCCATGTCCACAGCTCTCTTAGTCTCTTTCTTCACTTTTACACTTTTTTTTTCTGTCTTTTCATTTCTCCTCTTCATCTCTAGAATCAAGCCATGGTGTAATTGTGACACGTGTCGCACCTATCTCAATATCTCTTGGACTATACACTTTCCAAACCTTTGCGACTGGTATACTCATCTTCTTCGTGCTTCACCCACCGGGACCATCCATCTCCACGTCCTCAATAACACTATTACATCCAATCCCGATAACGTTCAGCACATCCTCAAAACTAAATTCCACAATTATCCTAAGGGCACACCTTTTTCTACTCTCCTTGGCGACCTTCTCGGCAACGGAATCTTCAACTCCGATGGCCATTTCTGGCAATTCCAACGCAAGATGGCCAGCCTTGAGCTCGGCAGCGTCGCCATTCGCTCCTATGCCCTCCAAATTGTCAACCAAGAGATCCAAACCAGGCTGATTCCTCTCCTCGAATCGGTTTCCGGCCAACAAAATAGATTGTTAGACATTCAAGACATCCTTAGAAGATTCTCTTTCGACATTATTTGTAAATTTTCATTTGGAATGGATCCTGAGTGTCTCATTTCTTCTTTGCCGGAGTCCAAATTGGCAGACAGCTTCGACCTCGCATCTAAGCTCTCAGCAGAGCGAGCAATGTCGCCATCACCGCTCATATGGAAGATGAAGCGATTACTCAATATTGGTTCGGAAAAAAAGCTAAAAGAAGCCATTGGAGTGGTAGACAATGTGGCCATGGACATCATAAAGCAGAGGAGGAGGGAGATGGTGACTATGGCGGGTCTGAACAAATCAGACTTGTTGTCTAGATTCATGGAGTCCATCGAAGACGACAAATACCTAAGAGACATAGTGATCAGTTTCTTGCTAGCGGGTCGGGACACAATCGCAGCAGCGTTGACCGGATTTTTCATTCTGCTTTCGAAGAACCCGCATGTGGGGTCAACCATCCGGCAGGAGCTGGAGCGGGTGATGGAAGAGGATCAGGAATTACCCACCTTTGAGCAAATGAGGAGCATGCATTACCTGAATGGAGCGCTTCACGAGAGCATGAGGCTGTTCCCTCCGGTTCAGTTTGATTCAAAGTATGCTCAAGAAGATGACGTCTTGCCAGATGGCACTTTTGTCAGGAGAGGGAGTCGGGTCACTTACCACCCCTATGCTATGGGTCGGATGGACACTATTTGGGGCCCCGATTCCGCTCAGTTTCGACCCGAAAGGTGGTTGAATACAGATGGTGTTTTCGTTCAGCAATGTCCCTTTAAGTACCCGGTTTTTCAAGCCGGGGTGAGAGTCTGTTTGGGAAAAGACTTGGCCTTGATGGAGATCAAGTCCATTGCCGCTGCCATTCTCCGCCGCTTTGATGTCCGGGTTGTTGGGCCTAATACGGAGCCCTGCTTCGCTCCAGGCCTTACTGCCACTGTGCGGGGCGGGTTGCCGGTTCAAGTTACCCAAAGGTGTTGA 1515 0.4812 MEMLHIMTTSAMSTALLVSFFTFTLFFSVFSFLLFISRIKPWCNCDTCRTYLNISWTIHFPNLCDWYTHLLRASPTGTIHLHVLNNTITSNPDNVQHILKTKFHNYPKGTPFSTLLGDLLGNGIFNSDGHFWQFQRKMASLELGSVAIRSYALQIVNQEIQTRLIPLLESVSGQQNRLLDIQDILRRFSFDIICKFSFGMDPECLISSLPESKLADSFDLASKLSAERAMSPSPLIWKMKRLLNIGSEKKLKEAIGVVDNVAMDIIKQRRREMVTMAGLNKSDLLSRFMESIEDDKYLRDIVISFLLAGRDTIAAALTGFFILLSKNPHVGSTIRQELERVMEEDQELPTFEQMRSMHYLNGALHESMRLFPPVQFDSKYAQEDDVLPDGTFVRRGSRVTYHPYAMGRMDTIWGPDSAQFRPERWLNTDGVFVQQCPFKYPVFQAGVRVCLGKDLALMEIKSIAAAILRRFDVRVVGPNTEPCFAPGLTATVRGGLPVQVTQRC 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00235 504 SUPERFAMILY Cytochrome P450 56 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 Pfam Cytochrome P450 79 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PANTHER CYTOCHROME P450 18 500 - -
Aip03g00235 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PANTHER CYTOCHROME P450 94C1 18 500 - -
Aip03g00235 504 Gene3D Cytochrome P450 59 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00235 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00235 Aip-Chr3 2342168 2344070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00235 33 503 Cytochrome P450 AT2G27690 61.297 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00235 K20624 - gmx:100813091 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00235 03 2342168 2344070 Aip03g00235 03 2342168 2344070 ECH
Aip08g00629 08 5752446 5754287 Aip03g00235 03 2342168 2344070 ECH