Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00222 ATGGCGAGCCAAAGAATAGGAGGAGACACTGGTTTATCAGAGTCACTGATCACAAGTCATCACCATGCCTCTACTCATGGAGTTCTTCATGGAATCAACACCCCATCATCAATCTTAATGAATGAAGAGGGAGCGTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAATCAAGACTAGAAATGATGAAGAAGCCAAAGCATCATCTTTATTCATCACAGGGAGGCCTGCAGCAACACTGGAAATGTTCCCTTCATGGCCAATCAGATTCCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGAGGGGATGAAAACACAGACTCAGGATCAGGATCAGGTGTGAACACCAACACCCTTTCAAGCAAATTGGAAACGGAACCCCATCATAATCATTTTCAATCACAAGATTCTCCAATTAGTAGCCACCAACAACAACAAGATCAAGAGGTGCAGCTGGCAACTAGTGATGCCTCAAGAAAAGGGCCATCACCCCAACAAAAGAAAAAAGGAGCGAGTTCCACATCGGAGAAGGCAGTGGATGCAAAGACACTGAGACGGTTGGCACAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTGTAGCAGATTAAAGCTTACTCAGCTGGAAAAGGAGGTTGAAAGAGCAAGATCACAGGTAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAATGATAGTGATAGTGGAGAGTTACATGAGCCACTACGACGACCTGTTCAGGCTGAAGGCGGAGGGTGCCAAGTGGGACGTGTTCCACATCATGAATGGCACCTGGACATCCCCGGCAGAGCGGTGCTTCCTGTGGATGGGTGGTTTCAGGCCGTCAGACCTGGTGGGGTTGCTCATACACCACTTGGAGCCTCTTGCGGAGCAGCAGATCATAGCCATGTACGGACTGAGACACTCATCACAGCAGGCTGAAGACGCTCTTTCTCAGGGGCTTGAGCAGCTCCACCACTCTCTCCTCCACACCATCTCCCTCCCTCAGATGCTTGCTGCCATGGCCAAGCTTTCCAACCTTGAAGCTTTCCTCCTTCAGGCTGATCATCTCAGGCAGCAGACACTTCACCAATTCTGTCGATTTCTCACCATTCGTCAAGCAGCTCGCTGTTTCCTTGTCATTGGAGACTACTATGCTCGTCTTCGCGCCCTTAGTTCTCTTTGGGCCTCCAGGACCCTCATCAACCATCACGATAACTCAACCATGGACTTGCAAACCCTTCAACCTTCTCCGCAAAATCATCTCTCTAATTTCTGA 1326 0.494 MASQRIGGDTGLSESLITSHHHASTHGVLHGINTPSSILMNEEGAFDFGELEEAIVLQGIKTRNDEEAKASSLFITGRPAATLEMFPSWPIRFHQTSRGGCKSGGGDENTDSGSGSGVNTNTLSSKLETEPHHNHFQSQDSPISSHQQQQDQEVQLATSDASRKGPSPQQKKKGASSTSEKAVDAKTLRRLAQNREAARKSRLRKKAYVQQLECSRLKLTQLEKEVERARSQVAGGGGGGGGGGGAMIVIVESYMSHYDDLFRLKAEGAKWDVFHIMNGTWTSPAERCFLWMGGFRPSDLVGLLIHHLEPLAEQQIIAMYGLRHSSQQAEDALSQGLEQLHHSLLHTISLPQMLAAMAKLSNLEAFLLQADHLRQQTLHQFCRFLTIRQAARCFLVIGDYYARLRALSSLWASRTLINHHDNSTMDLQTLQPSPQNHLSNF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00222 441 MobiDBLite consensus disorder prediction 107 127 - -
Aip03g00222 441 Coils Coil 205 232 - -
Aip03g00222 441 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Aip03g00222 441 Pfam Seed dormancy control 249 304 IPR025422 GO:0006351|GO:0043565
Aip03g00222 441 SUPERFAMILY Leucine zipper domain 186 229 IPR046347 GO:0003700|GO:0006355
Aip03g00222 441 ProSiteProfiles DOG1 domain profile. 201 414 IPR025422 GO:0006351|GO:0043565
Aip03g00222 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Aip03g00222 441 MobiDBLite consensus disorder prediction 94 189 - -
Aip03g00222 441 Gene3D - 185 235 - -
Aip03g00222 441 PANTHER TRANSCRIPTION FACTOR TGA9 70 242 - -
Aip03g00222 441 PANTHER TRANSCRIPTION FACTOR TGA9 247 415 - -
Aip03g00222 441 MobiDBLite consensus disorder prediction 136 176 - -
Aip03g00222 441 Pfam bZIP transcription factor 185 225 IPR004827 GO:0003700|GO:0006355
Aip03g00222 441 PANTHER TRANSCRIPTION FACTOR TGA9 70 242 - -
Aip03g00222 441 PANTHER TRANSCRIPTION FACTOR TGA9 247 415 - -
Aip03g00222 441 SMART brlzneu 182 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00222 Aip-Chr3 2236821 2240167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00222 123 441 bZIP Transcription Factor Family AT1G08320 50.541 4.07e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip03g00222 DOG1 2.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00222 K14431 - gmx:778195 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00646 08 6057363 6064993 Aip03g00222 03 2236821 2240167 PCT