Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00217 ATGGCGGAAGAACACAGGTGCCAAGCTCCACGCCTCTGCGTAAATAATTGTGGATTCTTTGGAAGCCCGACCACAAACGGCCTCTGCTCCAAGTGCTATCGCAATCTCCAGCTTAAGGAGCAGCAGTCTTCCTCTGCCAAATTGGTCCTCAACCAAACCCTGCAGGTTCCTCCGGCAGCAGAACCTATTTCTACTCCTTCAGCATCAACATCATCATCTTGTACGGAGGAGCTTGATCGTCCTTGCAGCGCAGCAGTGATGGAGGAGAAGGTAGCAGCGAATCGGTGTGCAAGATGCAGGAGGCGTGTGGGGCTTACGGGGTTCAAGTGCAGGTGTGGGTTGACGTTGTGTGGGTCCCATCGGCACCCAGAACAACACTCATGCCACTTCGATTTCAAGGGATTCGGGAGGGAGCAAATCGCAAAGGCAAACCCTCTAATCAAGGCCGACAAGCTTAACAAGATTTGA 468 0.5278 MAEEHRCQAPRLCVNNCGFFGSPTTNGLCSKCYRNLQLKEQQSSSAKLVLNQTLQVPPAAEPISTPSASTSSSCTEELDRPCSAAVMEEKVAANRCARCRRRVGLTGFKCRCGLTLCGSHRHPEQHSCHFDFKGFGREQIAKANPLIKADKLNKI 155
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00217 155 Gene3D - 71 151 IPR035896 -
Aip03g00217 155 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Aip03g00217 155 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Aip03g00217 155 Gene3D - 1 70 - -
Aip03g00217 155 SUPERFAMILY AN1-like Zinc finger 84 150 IPR035896 -
Aip03g00217 155 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Aip03g00217 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 54 - -
Aip03g00217 155 Pfam AN1-like Zinc finger 96 132 IPR000058 GO:0008270
Aip03g00217 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 155 - -
Aip03g00217 155 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 155 - -
Aip03g00217 155 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Aip03g00217 155 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip03g00217 Aip-Chr3 2176860 2177710 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00217 1 155 C2H2 Transcription Factor Family AT3G52800 46.524 6.30e-41 133
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00217 - - mesc:110625469 206.838