Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g00217 | ATGGCGGAAGAACACAGGTGCCAAGCTCCACGCCTCTGCGTAAATAATTGTGGATTCTTTGGAAGCCCGACCACAAACGGCCTCTGCTCCAAGTGCTATCGCAATCTCCAGCTTAAGGAGCAGCAGTCTTCCTCTGCCAAATTGGTCCTCAACCAAACCCTGCAGGTTCCTCCGGCAGCAGAACCTATTTCTACTCCTTCAGCATCAACATCATCATCTTGTACGGAGGAGCTTGATCGTCCTTGCAGCGCAGCAGTGATGGAGGAGAAGGTAGCAGCGAATCGGTGTGCAAGATGCAGGAGGCGTGTGGGGCTTACGGGGTTCAAGTGCAGGTGTGGGTTGACGTTGTGTGGGTCCCATCGGCACCCAGAACAACACTCATGCCACTTCGATTTCAAGGGATTCGGGAGGGAGCAAATCGCAAAGGCAAACCCTCTAATCAAGGCCGACAAGCTTAACAAGATTTGA | 468 | 0.5278 | MAEEHRCQAPRLCVNNCGFFGSPTTNGLCSKCYRNLQLKEQQSSSAKLVLNQTLQVPPAAEPISTPSASTSSSCTEELDRPCSAAVMEEKVAANRCARCRRRVGLTGFKCRCGLTLCGSHRHPEQHSCHFDFKGFGREQIAKANPLIKADKLNKI | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g00217 | 155 | Gene3D | - | 71 | 151 | IPR035896 | - | |
Aip03g00217 | 155 | ProSiteProfiles | Zinc finger AN1-type profile. | 90 | 136 | IPR000058 | GO:0008270 | |
Aip03g00217 | 155 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Aip03g00217 | 155 | Gene3D | - | 1 | 70 | - | - | |
Aip03g00217 | 155 | SUPERFAMILY | AN1-like Zinc finger | 84 | 150 | IPR035896 | - | |
Aip03g00217 | 155 | Pfam | A20-like zinc finger | 11 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Aip03g00217 | 155 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 54 | - | - | |
Aip03g00217 | 155 | Pfam | AN1-like Zinc finger | 96 | 132 | IPR000058 | GO:0008270 | |
Aip03g00217 | 155 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 155 | - | - | |
Aip03g00217 | 155 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 | 1 | 155 | - | - | |
Aip03g00217 | 155 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Aip03g00217 | 155 | SMART | AN1_Zf_4 | 96 | 133 | IPR000058 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g00217 | Aip-Chr3 | 2176860 | 2177710 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g00217 | 1 | 155 | C2H2 Transcription Factor Family | AT3G52800 | 46.524 | 6.30e-41 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g00217 | - | - | mesc:110625469 | 206.838 |