Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00206 ATGTCTTCCAACAACAAACAAGCTCTTTTCAAAACCGTATTCACAATAAACGGTAGCTGTGGCTGCGGCAAAACAAAGGCCTTAGAGGTACACGAACCAACCCCAAAACCCAAAATCTCCATTCCCAAGAACAACACAAATAACCCTAGCAGCATGGCTTCTTCATTCACCACTACTTCGCACAACGGTGCCTTCTCCGGCGCTGAGGACGAAGATTCCTCCACCACAATCTCTGAATCCGAAACCACCCATGACCATATCAGCAATAACCTTATTATCCCCAAACGAAGCCCACTCATGGATACACTTGCAGTTGAGAAGGACTCTTCGGACCCATATCATGATTTCCGGCATTCCATGCTCCAAATGATCTTCGAGAAAGAGATTGAATCTAAGGATGATCTTCAGGATCTTCTTCAGTGTTTTCTTCAGCTGAATGAACCTCATTACCATCATATCATCGTTAAGGCCTTCAGTCAGATATGTGAAGAGGCCTTCCCTGAGAAGGTTTGTACTACTACCCCTTCTATTAACAGAAGATCTTCCTCTTGTACGAACACCTTCATCGTTCACAAGACTTGCCGCTGA 588 0.4473 MSSNNKQALFKTVFTINGSCGCGKTKALEVHEPTPKPKISIPKNNTNNPSSMASSFTTTSHNGAFSGAEDEDSSTTISESETTHDHISNNLIIPKRSPLMDTLAVEKDSSDPYHDFRHSMLQMIFEKEIESKDDLQDLLQCFLQLNEPHYHHIIVKAFSQICEEAFPEKVCTTTPSINRRSSSCTNTFIVHKTCR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00206 195 MobiDBLite consensus disorder prediction 39 73 - -
Aip03g00206 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Aip03g00206 195 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 172 - -
Aip03g00206 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 172 IPR038933 GO:0045892
Aip03g00206 195 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Aip03g00206 195 MobiDBLite consensus disorder prediction 34 91 - -
Aip03g00206 195 Pfam Transcriptional repressor, ovate 109 164 IPR006458 -
Aip03g00206 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 104 162 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00206 Aip-Chr3 2075872 2076459 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip03g00206 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00206 - - gmx:102660065 212.616