Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00201 ATGACTGATGCTTCATTTGAGAGTGAGACGGAGTATTACACCCCAAACCATCACAAACGATACTATCCAACACCAGTAAGCCATCACAACGTCTTTGGCTCGGAGTCTTTCACAATGTCCACCTCTCAAACTCAACGCAAAGCCGCCAGCTCTAGAAGAGTTCGCCCCAACAGAATTCCCACGACGCCTTTCGCTTCGGATGATGATCATTCGTGGCAAGGAGAGGTTTCTTGGAAGTTCGAGGCCAGGGGATGGCAAGAGTACAGCGCACGCATGGGCTCTGTTCTGAATCTATGGCCAGTCGACTCCCCATTTGAACACAGCCGCGTGTTTCGTCAGTCGGCCAATGACTACTTCCTTTCACAAACTAGTCGATTCAAAGGCCACTCAGGCTCAACTTATCATAATGAGCATTCCGTCTACGGAAGAGTTGAGCTCCAGAGCTATGTTGCCGGGGACAGTGACCTTAGCGAGTCTCGTGGTTTCTCTAAAACAAAGGTCATAAAAGAAAGAGATAGCATAATAAGAAACAAGACTAGTCCGTTGGCCAAAGAAGACGAGCTCAGTTGGATAGACTATAGCATCTCTGATAAAGAAATTGGTGGGTATCACGCTGAATTCTCTTATACTAAACATGACCACCGTGGCAAGCATGGCGACAGTTACAGACTACCATCAGCCGTAGATAAATTCGGTACCCCGAGTTATGGTGTTGACAAGGTTACAGGGTATGAGTATGATGAAGAGGGCGAGGAGGAATTGGATGAGGAAGATGCAGGGCCTCCAAAGACAATTGGGTTGTTTCGGCTATTTAGGTATGCAACAAAGTGGGATTGGGTTCTTGTACTTGTAGGTTGTTTAGGTGCTTTCATAGATGGAGGCTCACTTCCTTTTTATTCTTATCTTTTTGGAGAATTGGTCAATAAGATTTCACAAAATGGGAATAATAAGCAAATGATGGAGGATGTAGAGAAGATATGCATATATATGACCGGGTTGGCTGCAGTTGTTTCGGTTGGAGCATATTTGCAGATCGCATGTTGGAGGTTAGTGGGCGAGAGATCTGCTCAAAGAATGAGGACGGAGTATTTAAGAGCAGTTCTTCGACAGGATATTAGTTTTTTTGATACACAGATCAACACTGGTGATATTATGCATGGAATAGCCAGTGATGTTGCACAAATCCAAGAAGTTATGGGAGAGAAGATGGCTCACTTTGTTCATCATATATTTACATTTATATGTGGCTACATAGTTGGATTTAGAAGATCGTGGAGAGTCTCTTTGGTGGTATTCTCAGTCACCCCATTAACAATGTTTTGTGGTATAGTCTACAAAGCAATTTATGGTGGTCTAACAGCAAAAGAAGAAGCTTCTTACAGGAAAGCTGGTGTTATTGCGGAACAAACGATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCGGAAAGGCAATTGGCAGCAAAATATGCTCAATTACTACAAAAATCAGCCCCAATAGGCGCAAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGCATTATCTATTTAGTAACATATTCGACATGGGCCTTGGCATTTTGGTATGGCTCCATCTTAATTGCCACGAACAAACTTGATGGGGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGAGGTCTAGCATTGGCGCTGTCATATTTTGCACAATTTGCACAAGGTACTGTTGCAGCAAGTCGTGTATTCTCTGTTATAGACAGAATTCCTGAGATTGATCCATATAGCCCTGACGGAAGGAAGCTTACTGTTGTCCGTGGTAGAATTGAGTTAAAAAATGTTAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAATTTAGTATTTTCATCGACAAAAACTTTGGCACTGGTTGGTGCTAGGAAATTTATCATTGTGCTTTCTTTCAATGTTATCCTTGTAGGGACGATAACCTTGGACGGCCATGATTTGAGGACGTTGCAAGTCAAGTGGCTAAGAGGTCAAATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCAACCTCCATACTAGAAAACGTTATGATGGGGAAAGATAATGTCACTAAGGAGGAGGCAATTGCTGCTTGCATTGCTGCAGATGCTCACAATTTCATATCTAACTTACCACTTGGCTATGACACTCAGGTCGGAGATAGGGGCACAAAACTATCAGGTGGTCAAAAGCAGAGAATCGCACTGGCTCGAGCAATAATCAAAGATCCTAAAATCCTTCTTTTAGACGAACCTACCAGCGCTCTTGATGCTGAGTCAGAGTCTGCAGTCCAACGAGCCATGGACAAGATTTCTGTGGGTCGAACAACCATTGTCATTGCTCATAGGATAGCTACTGTAAAGAATGCTCATGCCATCGTGGTCCTCGAAAATGGTACTGCCATTGAGATGGGTAACCATCTCCAGCTTATAGGGAAAGGGGGAACCTACTATAACCTTGTCAAACTCGCCAGCGAGGCCATATCAAGGCCTCTCTCTAATGAACATGACATGCAAAAATCCAATGACGACTCAATTGCTGATGTATCAAGATATGCAGCAGATATCTCGAGGCCTAAACATTTAAAATACGCTCAGGAGAAAAAAGTAGAGATCGAAGACGAGCCAAACAAAATGCCAAAAAAATTTAGACTTTCTGAGATATTGAAATTGCAAAAGCCAGAGCTTTGGATGCTACTTTTAGGATTCTTTCTGGGTATGTTTGCAGGCGCTTTTCTGTCTCTTTTTCCTTTGGTTTTAGGCATATCTCTTGGGGTATATTTTGATGATGACACTGATAAGATGAAGAGAGATGTTGGACACCTTTGTTTAGCACTTGTTTGTCTTGGATTCGGTTGTATTCTTTCCATGACAGGACAACAAGGATTTTGTGGTTGGGCAGGATCAAAGCTTACACTAAGGGTTAGAAACCTCTTGTTCCAGTCCATCTTGAAACAAGAACCCGGGTGGTTTGATTTTGATAAAAACTCGACTGGAGTGTTAGTGTCAAGGCTCTCCATTGATTGTGTCAGCTTTCGTTCAATACTTGGTGATCGATTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCAGCCGTCGGTCTTGGTGTTTCCTTTGTCATCAATTGGAAACTAACCCTTTTGGCGGCTGCTGTTACTCCCTTTACTCTTGGTGCAAGTTATGTAAGCTTGCTTATAAATATTGGACCACATGTTGATAACAATGCATATGCCAAAGCTAGCAATATTGCTTCTGGTGCAGTATCAAACATAAGAACGGTTACCACGTTTTCTGCCCAGGAAATATTAATTAAGTCCTTTGATCAAGCCTTATCAGAACCTCAAAGGAAATCATTGAAAAGTTCGCACATTCAAGGTCTAACATTTGGGTTCTTTCAAGGTGCCATGTATGGAGCGTACACCTTGGTTCTTTGGTTTGGTGCCAGACTTGTAGATCGTAGCGAAGCGAAGTTGGGAGATGTTTTTAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCTATGGCGGCCACAGCAATCCCTTCTGTTCAAGATATCATAAACCGGAGGCCGCTGATAGGGAACGATAAGTCAATAAGAAGCAAGAAAGTAGAAGATCGATTAAAGTCGCCTTTCAAAATAGAATTCAAAATGGTCACATTTGCATACCCATCTAGGCCTGCAGTTACAGTGCTAAGGGATTTCTCTTTGAAGGTCAAAGGTGGAAGCACCGTGGCCTTGGTAGGACCCAGTGGATCAGGAAAATCAACCATCATATGGTTGATACAGAGGTTCTATGATCCAAATAAAGGAAAAGTGATGCTAAGTGGGGTAGACCTTATGGAAATTGATGTTAAGTGGTTAAGGAGGCAAATGGCTTTAGTGGGTCAAGAACCAGCACTGTTTTCTGGGAGTATAAGGGAGAACATTACCTTTGGGGACCCAAATGCGTCATGGGCTGAAATTGAAGCAGCTGCAAAAGAAGCTTACATCCACAAATTCATTAGTGGCCTTCCTCAAGGTTATGAGACCCAGGTTGGTCAAAGCGGGGTCCAACTATCAGGTGGCCAAAAACAACGAATTGCAATAGCAAGGGCTATACTGAAGAAATCAAGGGTGGTTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAGTCAGAGAAACACATCCAATATGCCCTTAAGAAAGTTTCCAAGGAAGCAACAACCATCATTGTAGCCCATCGTCTATCGACAATTAGAGAAGCTGACAACATAGTGGTTATGAAAGATGGGGGAGTAGCAGAGTATGGAAGTCATGACACACTCATGACTTCCCATCAAAATGGTCTGTATGCTAGCCTAGTTCGATCTGAGACCGAAGCCAATGCCTTTGCTTGA 4452 0.4295 MTDASFESETEYYTPNHHKRYYPTPVSHHNVFGSESFTMSTSQTQRKAASSRRVRPNRIPTTPFASDDDHSWQGEVSWKFEARGWQEYSARMGSVLNLWPVDSPFEHSRVFRQSANDYFLSQTSRFKGHSGSTYHNEHSVYGRVELQSYVAGDSDLSESRGFSKTKVIKERDSIIRNKTSPLAKEDELSWIDYSISDKEIGGYHAEFSYTKHDHRGKHGDSYRLPSAVDKFGTPSYGVDKVTGYEYDEEGEEELDEEDAGPPKTIGLFRLFRYATKWDWVLVLVGCLGAFIDGGSLPFYSYLFGELVNKISQNGNNKQMMEDVEKICIYMTGLAAVVSVGAYLQIACWRLVGERSAQRMRTEYLRAVLRQDISFFDTQINTGDIMHGIASDVAQIQEVMGEKMAHFVHHIFTFICGYIVGFRRSWRVSLVVFSVTPLTMFCGIVYKAIYGGLTAKEEASYRKAGVIAEQTISSIRTVFSFVAERQLAAKYAQLLQKSAPIGAKIGFAKGAGMGIIYLVTYSTWALAFWYGSILIATNKLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFSVIDRIPEIDPYSPDGRKLTVVRGRIELKNVSFAYPSRPDSLILHSLNLVFSSTKTLALVGARKFIIVLSFNVILVGTITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNVTKEEAIAACIAADAHNFISNLPLGYDTQVGDRGTKLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESAVQRAMDKISVGRTTIVIAHRIATVKNAHAIVVLENGTAIEMGNHLQLIGKGGTYYNLVKLASEAISRPLSNEHDMQKSNDDSIADVSRYAADISRPKHLKYAQEKKVEIEDEPNKMPKKFRLSEILKLQKPELWMLLLGFFLGMFAGAFLSLFPLVLGISLGVYFDDDTDKMKRDVGHLCLALVCLGFGCILSMTGQQGFCGWAGSKLTLRVRNLLFQSILKQEPGWFDFDKNSTGVLVSRLSIDCVSFRSILGDRFSVLLMGLSSAAVGLGVSFVINWKLTLLAAAVTPFTLGASYVSLLINIGPHVDNNAYAKASNIASGAVSNIRTVTTFSAQEILIKSFDQALSEPQRKSLKSSHIQGLTFGFFQGAMYGAYTLVLWFGARLVDRSEAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVQDIINRRPLIGNDKSIRSKKVEDRLKSPFKIEFKMVTFAYPSRPAVTVLRDFSLKVKGGSTVALVGPSGSGKSTIIWLIQRFYDPNKGKVMLSGVDLMEIDVKWLRRQMALVGQEPALFSGSIRENITFGDPNASWAEIEAAAKEAYIHKFISGLPQGYETQVGQSGVQLSGGQKQRIAIARAILKKSRVVLLDEASSALDLESEKHIQYALKKVSKEATTIIVAHRLSTIREADNIVVMKDGGVAEYGSHDTLMTSHQNGLYASLVRSETEANAFA 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00201 1483 Pfam ABC transporter 656 766 IPR003439 GO:0005524
Aip03g00201 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1233 1474 IPR027417 -
Aip03g00201 1483 Pfam ABC transporter transmembrane region 911 1182 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g00201 1483 Pfam ABC transporter transmembrane region 283 551 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g00201 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1473 IPR003439 GO:0005524
Aip03g00201 1483 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Aip03g00201 1483 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524
Aip03g00201 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 834 IPR027417 -
Aip03g00201 1483 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
Aip03g00201 1483 Gene3D - 1231 1482 IPR027417 -
Aip03g00201 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 912 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g00201 1483 PANTHER ABC TRANSPORTER B FAMILY 215 1482 - -
Aip03g00201 1483 SUPERFAMILY ABC transporter transmembrane region 262 590 IPR036640 GO:0005524|GO:0016021
Aip03g00201 1483 CDD ABC_6TM_Pgp_ABCB1_D1_like 283 578 - -
Aip03g00201 1483 Gene3D ABC transporter type 1, transmembrane domain 327 1202 IPR036640 GO:0005524|GO:0016021
Aip03g00201 1483 Gene3D ABC transporter type 1, transmembrane domain 224 318 IPR036640 GO:0005524|GO:0016021
Aip03g00201 1483 SMART AAA_5 632 827 IPR003593 -
Aip03g00201 1483 SMART AAA_5 1264 1450 IPR003593 -
Aip03g00201 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 283 570 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g00201 1483 SUPERFAMILY ABC transporter transmembrane region 892 1214 IPR036640 GO:0005524|GO:0016021
Aip03g00201 1483 CDD ABC_6TM_Pgp_ABCB1_D2_like 901 1216 - -
Aip03g00201 1483 CDD ABC_MTABC3_MDL1_MDL2 1237 1474 - -
Aip03g00201 1483 Gene3D - 603 857 IPR027417 -
Aip03g00201 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 835 IPR003439 GO:0005524
Aip03g00201 1483 PANTHER - 215 1482 - -
Aip03g00201 1483 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00201 Aip-Chr3 2029315 2039826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00201 942 1483 Calmodulin-binding Proteins AT2G36910 36.765 9.39e-99 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00201 K05658 - gmx:100816700 2108.57