Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00199 ATGGTACTTTTAAGGAATCTTCATGATGCTTTGTCTGGACATACTTCTGCCAATGTAGAAGAAGCGGTTGCATACTCTGAGCACAGTGCAACTAAGTGTATTGGCATGACAATTGAGACAAGGCCAGATTATTGTCTTGGGCCTCACTTGCGGCAAATGCTTTCCTATGGTTGTACACGGTTGGAAATTGGAGTCCAAAGCACCTACGAGGATGTTGCTCGAGACACTAACAGAGGGCATACAGTAGCTGCTGTGGCTGATTGTTTTTGCTTGGCAAAAGATGCTGGTTTCAAGGTTGTTGCTCACATGATGCCTGATCTTCCTAATGTTGGTGTTGAAAGGGACATGGAAAGTTTCCGGGAGTTTTTTGAGAGCCCCTCATTTAGAGCAGATGGGCTTAAAATATATCCTACACTTGTAATACGTGGAACTGGACTTTATGAGCTCTGGAAAACTGGGAGGTATAGAAATTATCCACCTGAGCAACTTGTGGATATCATAGCTAGGATTCTTGCTATGGTGCCACCTTGGACACGTGTTTATAGAGTTCAACGGGATATTCCCATGCCTCTGGTTACATCTGGGGTTGAGAAAGGAAATCTGAGAGAGCTAGCATTAGCTCGAATGGAAGACCTGGGATTGAAATGTCGCGACGTTCGGACCAGAGAAGCTGGAATCCAGGATATCCTTGTTGGTCTTCTACGACTGCGAAAATGTGGCCGAAACATTACTTGCCCAGAGCTTATGGGCAAGTGTTCTATTGTTCGTGAACTTCATGTTTATGGAACTGCTGTACCAGTTCATGGGAGGGATGCTGACAAGCTACAACACCAGGGTTATGGTACGCTTCTAATGGAGGAGGCAGAGCGTATTGCTTTAAGAGAACACCGATCAACAAAAACAGCTGTTATTTCAGGGGTTGGCACCCGCCATTATTACAGGAAACTGGGATATGAGCTTGAAGGGCCTTACATGGTTAAATATCTAGTATAA 993 0.4471 MVLLRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDILVGLLRLRKCGRNITCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIALREHRSTKTAVISGVGTRHYYRKLGYELEGPYMVKYLV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00199 330 Pfam Radical_SAM C-terminal domain 131 210 IPR032432 -
Aip03g00199 330 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 153 330 IPR000182 GO:0016407
Aip03g00199 330 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 227 329 IPR039661 -
Aip03g00199 330 Pfam Radical SAM superfamily 22 113 IPR007197 GO:0003824|GO:0051536
Aip03g00199 330 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 3 229 IPR039661 -
Aip03g00199 330 PANTHER ELONGATOR COMPLEX PROTEIN 3 227 329 IPR034687 -
Aip03g00199 330 Pfam Acetyltransferase (GNAT) family 229 318 IPR000182 GO:0016407
Aip03g00199 330 Gene3D - 223 328 - -
Aip03g00199 330 SMART MiaB 2 169 IPR006638 GO:0003824|GO:0051536
Aip03g00199 330 PANTHER ELONGATOR COMPLEX PROTEIN 3 3 229 IPR034687 -
Aip03g00199 330 SUPERFAMILY Radical SAM enzymes 31 176 - -
Aip03g00199 330 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 226 326 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip03g00199 Acetyltransf_1 2e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00199 K07739 - gmx:100784961 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00199 03 2012177 2014165 Aip03g00199 03 2012177 2014165 ECH