Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip03g00168 | ATGACGTCGGAGAAGCCGCCGGATTCGGACTCATCGAAGCGCCGGAGATCGTCGGTGCTTCCCCTGGAGGTCGGGACGAGGGTTATGTGCCGGTGGAGGGACGGCAAATACCACCCTGTCAAGGTCATCGAACGCCGCAAGGTTTCTTCCAGTGACCCCAACGATTACGAGTATTACGTTCATTACACAGAGTTTAATAGAAGGCTTGATGAGTGGGTGAAGCTCGAGCAGCTTGATCTCGAGTCAGTAGAGGCTGTTGTTGATGAGAAAGTGGAGGAGAAGGGGGCAACAGGCTTGAAGATGACACGCCACCAGAAGAGGAAGATTGATGAGACACATGTAGAGGGCCACGAGGAGCTTGATGCTGCCAGTTTGCGAGAACACGAAGAATTTACCAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCCTTCCCACCAGAATACAACGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAACGGAAAGAACAGCTTCAGAGGCATATGAGAAAATGTGATCTTAAGCATCCCCCTGGTGATGAAATATACAGAAGTGGTACCCTGTCAATGTTTGAGGTTGACGGGAAGAAGAACAAGGTTTATGGCCAGAATCTGTGTTATTTGGCAAAGTTGTTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTATTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGCCACATGGTTGGCTATTTCTCTAAGGAAAAACATTCCGAGGAATCCTACAATTTGGCATGTATCCTCACGCTTCCACCTTACCAAAGGAAAGGTTATGGCAAATTTCTAATAGCCTTCTCATATGAACTTTCCAAGAAGGAGGGCAAAGTTGGCACGCCAGAAAGACCCCTTTCAGATCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTGGACATTCTGAAAAAGCACAAGGGTAACATTTCCATCAAGGAGCTAAGTGATATGACTGCCATTAAAGCCGAAGATATATTGACAACTCTTCAGAGCCTAGAATTGATCCAATACAGGAAAGGACAGCATGTTATTTGTGCAGATCCTAAGGTTCTTGATCGCCATCTTAAAGCTGCTGGTAGAGGGGGTCTTGAGGTTGATGTTAGCAAATTGATCTGGACCCCTTACAAGGAACAAAGTTGA | 1227 | 0.4515 | MTSEKPPDSDSSKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRKVSSSDPNDYEYYVHYTEFNRRLDEWVKLEQLDLESVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS | 408 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip03g00168 | 408 | CDD | CBD_MOF_like | 25 | 94 | - | - | |
| Aip03g00168 | 408 | CDD | NAT_SF | 244 | 302 | - | - | |
| Aip03g00168 | 408 | Gene3D | - | 191 | 403 | - | - | |
| Aip03g00168 | 408 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 4 | 408 | - | - | |
| Aip03g00168 | 408 | Gene3D | - | 10 | 132 | - | - | |
| Aip03g00168 | 408 | Gene3D | - | 133 | 189 | - | - | |
| Aip03g00168 | 408 | SMART | chromo_7 | 36 | 95 | IPR000953 | - | |
| Aip03g00168 | 408 | Gene3D | - | 311 | 391 | IPR036388 | - | |
| Aip03g00168 | 408 | PANTHER | HISTONE ACETYLTRANSFERASE | 4 | 408 | - | - | |
| Aip03g00168 | 408 | Pfam | MOZ/SAS family | 193 | 370 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Aip03g00168 | 408 | SUPERFAMILY | Chromo domain-like | 15 | 133 | IPR016197 | - | |
| Aip03g00168 | 408 | Pfam | RNA binding activity-knot of a chromodomain | 22 | 80 | IPR025995 | - | |
| Aip03g00168 | 408 | Pfam | MYST family zinc finger domain | 134 | 188 | IPR040706 | - | |
| Aip03g00168 | 408 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 133 | 404 | IPR016181 | - | |
| Aip03g00168 | 408 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 132 | 403 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip03g00168 | Aip-Chr3 | 1729485 | 1733843 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip03g00168 | 8 | 408 | C2H2 Transcription Factor Family | AT5G64610 | 91.521 | 0.0 | 773 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip03g00168 | K11308 | - | gmx:100819116 | 805.823 |