Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00160 ATGATGAATGGAAGAAGAATAATAACGATAATGGATCTAAATCTATTATCATATGTGAGGAGAAAATTACTACCATATAACATAGATGATGCTACGTTTTTTATTATATCTACCTTCATAATCATCATACTAGTACTACTATTTTTTTTTCATAAACTCAAAATTAGAAGAACCAAATTGAAGCTACCACCATGTCCACCAAAACTCCCTTTCATTGGAAATTACCATCAACTAGGAACACTTCCTCACCGCACTTTCCAATCTCTATCAAAAACCTATGGCCCTTTAATTTTACTCTACCTAGGCCACCTTCGAGTTTTGGTAGTTTCGTCGGCCGAATTGGCGAAAGAAGTCATGGAAACAAACGATGTGGTTTTCGCTAGCCGGCCGCACCACACGGCCACGAGGGTCTTGCTATATGGTTGCAAGGACATCGCATTCGAGTCCTACGGCGAAGCATGGAGACAGAAAAGAAAGATTTGTGTTCTTGAGTTGCTTAGCGCGAAAAAGGTTCAATTACTCCAATATATAAAAGAAGAGGAGGTTACAATATTGATTAATAAATTACGTGAATCTTGCATGAATGTTAATAATAGTAGATTTTCTATAAATATTAGTGAGTTGATAATTGCAACATCAAACAACATAGTGTCAAGATGTGTTCTTGGACAAAAGTATGATAATCCAGATGGTAATAGCAGCTTTGGAGAGCTTGGAAGGAAGATGATGAGAGAATTGGCTGCTTTTAGTGTGGGAGATTTCTTCCCTTTATTGGGTTGGCTTGATTTTCTCACTGGCCAAATACAAGAATTCAAGGCCACTTTTCATGCATTAGATGCTTTCTTTGATAAGGTGATTGAAGAACATAAGAGGAAAATGATGAAGAAAGAGGATGTTAAAAAGGGTCAATTAGACAAGATGGATTTTGTTGATATACTACTCCAAGTTCAAAAAGATGGTGTGCATGACTTTCAACTCACCAATGATAATCTCAAAGCAATCTTAGTGGACATGTTTGCTGGAGCGAGTGACACTACTTCAACACTTTTGGAATGGACATTAGCAGAACTGATTAAGAATCCAAACACCATGAAGAAAGTTCAAGAAGAAGTAAGAAAAGTTGTTGGGTGCAAATCAAAAATAGATGAAATTGATGTTAATCAAATGGAGTACCTAAAATGTGTAATAAAAGAGACTTTAAGGTTGCATCCACCAGCTCCTTTCATAACACCTAGAGAAACCCTAAGTGATGTGAGGCTAAAAGGGTTTGATATTCCATCAAAAACAAGAGTATTTATAAATGCATGGGCAATTCAAAGGGACCCAAAAATTTGGAAGAACCCTGAAGAGTTCATTCCTGAAAGATTTGAGGAAAACCAAGTTGATTTTCTAAGACAAGATTTTCATTATATCCCCTTTGGTTTTGGAAGAAGAGGATGTGCTGGAATTTCATTTGGACTTGCTTCTACTGAATTCATTCTTGCTAATCTCCTATATTGGTTTAATTGGAAACTACCTAATAATAGTGTAGGTGTGAATATGCAAGATATTGACATGGGTGAGACTTATGGGCTCACTGTAACTAAGAAAGTGCCACTATATCTTGAACCTACATTATATATTATACATTAA 1632 0.3603 MMNGRRIITIMDLNLLSYVRRKLLPYNIDDATFFIISTFIIIILVLLFFFHKLKIRRTKLKLPPCPPKLPFIGNYHQLGTLPHRTFQSLSKTYGPLILLYLGHLRVLVVSSAELAKEVMETNDVVFASRPHHTATRVLLYGCKDIAFESYGEAWRQKRKICVLELLSAKKVQLLQYIKEEEVTILINKLRESCMNVNNSRFSINISELIIATSNNIVSRCVLGQKYDNPDGNSSFGELGRKMMRELAAFSVGDFFPLLGWLDFLTGQIQEFKATFHALDAFFDKVIEEHKRKMMKKEDVKKGQLDKMDFVDILLQVQKDGVHDFQLTNDNLKAILVDMFAGASDTTSTLLEWTLAELIKNPNTMKKVQEEVRKVVGCKSKIDEIDVNQMEYLKCVIKETLRLHPPAPFITPRETLSDVRLKGFDIPSKTRVFINAWAIQRDPKIWKNPEEFIPERFEENQVDFLRQDFHYIPFGFGRRGCAGISFGLASTEFILANLLYWFNWKLPNNSVGVNMQDIDMGETYGLTVTKKVPLYLEPTLYIIH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00160 543 Pfam Cytochrome P450 63 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 SUPERFAMILY Cytochrome P450 63 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 Gene3D Cytochrome P450 50 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00160 543 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 37 539 - -
Aip03g00160 543 PANTHER CYTOCHROME P450 71B11-RELATED 37 539 - -
Aip03g00160 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00160 Aip-Chr3 1599604 1683312 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00160 33 541 Cytochrome P450 AT3G48280 40.588 1.63e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00160 K20617 K00495 jre:108986001 607.446