Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00158 ATGGCACCAATTGCATATGTTCTAAAGCAATTGCCATGTGAGCTTAACTCAACCCTTTACCTTTCAATTCTAGTTGGCACCATTAGCATCCTTCTTGTGCTTAATCTCATCATCACAAGAAAAAGAAACAAATCCATTAATCTTCCACCATCACCACCAAAGCTACCTTTCATTGGAAACCTTCACCAATTAGGAACCTTGACACACCGTTCTTTCAAAGAACTCTCCAACAAGCATGGCCCTCTCATGTTCCTTCAGCTAGGGCAAATCCCAACACTAGTGGTTTCGTCGGCGAAAATAGCCAAAGAAATCGTCAAAAACCAAGATATTATTTTTTCAAACCGTCCCCAAACTACGGCCGCAAACATCTTTCTTTATGGTTGTAAAGATCTAGGGTTTATGCCCTACGGCGAAGAATGGAGACAGAAAAGAAAAGTTTGTGTTCTCGAACTTCTAAGTCTCAAAAGGGTTAAATCCTTTCTCCCAATAAGAGATCAAGAAGTTGTAGAACTGGTTGATACTATTAGTAAAGCGTGTTCAAGAGACGACGAATCGCCGTCATCTTTTGTGATTAATCTTAGTGAGTTGATGATTGCTACATCAAACAACATTGTTTCAAGATGTGTTCTTGGACAAAAGTATGATATCCCAGATGGGAGTGGACATGGAAGCTTTGGAGAGCTTGGGAGGAAGGTGATGGGGCAACTCACTGAATTTTGTGTTGGTGATTTCTTTCCTACATTGGGTTGGATTGATGTTGTTAGAGGCTTGATTTCTGAATTTAATGCTACCTTTGTAGAATTAGATTCTTTCTTGAATGGGGTAATTGAAGAGCATAAGAACAATAAAAAGAATGATGGTGAGGATGATAATAAAGACTTTGTGGATATACTTCTTCATCTTCAAGACAAGGGTTTGCTTGAATTTGAACTCACTCTAGAAGATCTCAAAGCAATGCTAATGGACATGTTTGTTGGAGGGAGTGATACTACTTCAACAAATTTGGAATGGATTTTTACTGAGCTCCTTAGGAACCCAAATACCATGAAGAAATTTCAAGAAGAGATAAGGAGAATTGTTGGTAACAAATCAAAGGTAGATGAAAATGATATAAATGAAATGAAGTATTTGAAATGTGTGATCAAAGAAGGTCTTAGGTTACATCCACCTGTTCCTATCTTGGTTCCTAGACAAACAACATCAAATGCAAAAGTAAAAGGTTATGATATTCCTTCAAAAACAACTGTATATTATAATGTTTGGGCAATTCATAGGGACCCTGAATTATGGGAGAATCCTGAAGAGTTCATTCCTGAAAGATTTGAAAATATACAAATTGATTATAAAGGACAAGATTTCCAATTATTGCCATTTGGTACCGGAAGAAGGGGTTGTCCTGGAATTTCATTTGGAATTGCTTCCACTGAAATTATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTACTAATGAAAATGGTGAACTAGTGCAAGACATAGACATGACTGAAATGTCTGGGATCACTGTTAGCAAGAAAGTGCCACTTCATCTTCATCCCATACCATTTTCTCTTTGA 1584 0.3725 MAPIAYVLKQLPCELNSTLYLSILVGTISILLVLNLIITRKRNKSINLPPSPPKLPFIGNLHQLGTLTHRSFKELSNKHGPLMFLQLGQIPTLVVSSAKIAKEIVKNQDIIFSNRPQTTAANIFLYGCKDLGFMPYGEEWRQKRKVCVLELLSLKRVKSFLPIRDQEVVELVDTISKACSRDDESPSSFVINLSELMIATSNNIVSRCVLGQKYDIPDGSGHGSFGELGRKVMGQLTEFCVGDFFPTLGWIDVVRGLISEFNATFVELDSFLNGVIEEHKNNKKNDGEDDNKDFVDILLHLQDKGLLEFELTLEDLKAMLMDMFVGGSDTTSTNLEWIFTELLRNPNTMKKFQEEIRRIVGNKSKVDENDINEMKYLKCVIKEGLRLHPPVPILVPRQTTSNAKVKGYDIPSKTTVYYNVWAIHRDPELWENPEEFIPERFENIQIDYKGQDFQLLPFGTGRRGCPGISFGIASTEIILANLLYWFDWKLPTNENGELVQDIDMTEMSGITVSKKVPLHLHPIPFSL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00158 527 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 SUPERFAMILY Cytochrome P450 49 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 Pfam Cytochrome P450 49 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 17 524 - -
Aip03g00158 527 PANTHER CYTOCHROME P450 71B11-RELATED 17 524 - -
Aip03g00158 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Aip03g00158 527 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00158 527 Gene3D Cytochrome P450 35 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00158 Aip-Chr3 1577791 1581116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00158 19 525 Cytochrome P450 AT3G48280 42.126 2.15e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00158 K20617 - gmx:100792382 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00158 03 1577791 1581116 Aip03g00158 03 1577791 1581116 ECH