Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00152 ATGCCGCAAGATTCCTCCGATCAAGACCTCGACGACGCCGATTCCGAGTTCGTTGAGGTTGACCCAACCGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGATTAAGGTGGCGGATCTGCTGCGTAACTCGGAAGATTTGGAGAGACTTTATTCCGAGGTTCATCTGCTCAAGACGTTGAAGCACAAGAATATAATTAAGTTCTACAATTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATTACCGAGATTTTCACCTCGGGGACATTACGCCAATATCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTTATATCTTCACAGTCATAATCCTCCAGTTATACATCGAGACCTTAAGTGTGACAACATTTTTGTCAACGGGAATCAAGGGGAGGTAAAAATTGGAGATTTAGGGTTGGCAGCTATTCTTCAACAGGCCCAAGCAGCTCACAGTGTCATAGGTACCCCAGAGTTCATGGCCCCAGAACTTTATGAAGAAGAGTACAACGAGCTTGTTGATATCTACGCTTTTGGAATGTGCTTGCTAGAGTTGGTAACCTTTGAGTATCCATACATTGAATGTTCCAATGCTGCTCAAATATACAAGAAAGTGACATCGGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCAAGAAGTTAAGGCATTCATTGAAAAGTGTATCGCTAATGTTTCAGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCTGACTCTGATAGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACCCATCATTCAGATGCAGGAAATAGTTCTAATAATCAAGCAATTGGAAAAAGTGTTCAGGATGTTTCTAGTGATTCAAATAGGGAATTCACAGTGGAAGGTCAGAGGAAGGATATTGATACAATATTTTTAAAACTGCGAATAGCAGACTCCTCAGGTCATGTTCGGAATATCCACTTCCCTTTCGATATTGGAGCGGACACTGCAATCTCTGTTGCTAGTGAAATGGTCGAGGAGTTGGAACTTACTGATCAAGATGTCACAACTATTGCTGAGACAATTGACTCTGAAATTCGATCTCTCATTCCTGGTTGGAACCCCAGTGAAACTCCTGCTACTAATGTTCCTGAAGATTCAGCAGTTTCAGATGGCTGTACCTCTGCTGAAACTAGGAGTGTGTCTTCTCCTACAGAAAATGATTCAACCACTCCTTCTAGCAATCTTGCATTAGAAATACTACGTTCAGGTCGTAAGTACTGGTCAGACTCACCTAAGGGAGTTTGTGGAAACCCTTTATCTAGGCATGGTTCTTCAAACTTGTCCCATATAGGTGATGCAAATGCTGAGAAAGGAAGCTTGACTGCAAATGGTGCTATTTCAGATGAACTTGAGCCTGACCAGGTTACCTGTGTCGGTGCTTACTGTGCAGAGAAGGAATGTGATAGTACTGGTGATTCCCCCTCCACCGAGAGAACTATTACCTCTGGATATTTGGAAGAAACCAGTGATGCGTCATCTCTGGAAAAAATACCGGAAAGTTTGGAAGTTTCTGAAATAGATGCCAGTAAAATAGCCCTGCAACTTGAGAGTTTGTTGACAAATCAAAAAGAGGAGCTGGAAGAACTAAAGAGGAAGCAAAAATTAGCTGTCTCTAATCTTTTGAAGGAACTTTCACCAGAAATTTGTAAGAAGGGCACTTCATGTTACTTGGAACTGGATTGCATAGTGCTTACACTTTTGAAGTTCATGGTTCATGCGTATAAAAAGCTTAATTTTCTGACGGCACAAGTGTTCCATATGATCTCAAAGGAAATTGCAGCACAGCACACTCAACAATGA 1962 0.421 MPQDSSDQDLDDADSEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAQAAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECSNAAQIYKKVTSGIKPASLAKVADQEVKAFIEKCIANVSERLPAKALLMDPFLQSDSDSESVGRSSRSGTHHSDAGNSSNNQAIGKSVQDVSSDSNREFTVEGQRKDIDTIFLKLRIADSSGHVRNIHFPFDIGADTAISVASEMVEELELTDQDVTTIAETIDSEIRSLIPGWNPSETPATNVPEDSAVSDGCTSAETRSVSSPTENDSTTPSSNLALEILRSGRKYWSDSPKGVCGNPLSRHGSSNLSHIGDANAEKGSLTANGAISDELEPDQVTCVGAYCAEKECDSTGDSPSTERTITSGYLEETSDASSLEKIPESLEVSEIDASKIALQLESLLTNQKEELEELKRKQKLAVSNLLKELSPEICKKGTSCYLELDCIVLTLLKFMVHAYKKLNFLTAQVFHMISKEIAAQHTQQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00152 653 Gene3D - 341 427 - -
Aip03g00152 653 MobiDBLite consensus disorder prediction 287 332 - -
Aip03g00152 653 MobiDBLite consensus disorder prediction 402 448 - -
Aip03g00152 653 MobiDBLite consensus disorder prediction 287 330 - -
Aip03g00152 653 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Aip03g00152 653 Coils Coil 566 597 - -
Aip03g00152 653 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00152 653 CDD STKc_WNK 25 285 - -
Aip03g00152 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Aip03g00152 653 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 605 - -
Aip03g00152 653 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Aip03g00152 653 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 345 399 IPR024678 GO:0004674|GO:0005524
Aip03g00152 653 MobiDBLite consensus disorder prediction 407 448 - -
Aip03g00152 653 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00152 653 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00152 653 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Aip03g00152 653 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00152 Aip-Chr3 1499984 1503025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00152 15 406 MAP Kinase Kinase Kinase AT3G22420 54.566 1.58e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip03g00152 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00152 K08867 - gmx:100301899 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00152 03 1499984 1503025 Aip03g00152 03 1499984 1503025 ECH