Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00151 ATGGCTCTCGCCGCCCTCGGAAACAGCGCTCCGAAGAAGTACGACGAGATCGACGCCGCGCCGGAGGAAAGGGCGCGTGGAATCACCATCAACACTGCGACGGTGGAGTACGAGACGGAGAACCGCCACTATGCACACGTGGACTGCCCTGGACACGCTGATTACGTCAAGAACATGATCACCGGAGCTGCGCAGATGGATGGCGCTATATTGGTGGTTTCCGGTGCCGACGGACCCATGCCGCAGACTAAGGAGCACATCCTTCTTGCTAAGCAAGTTGGTGTTCCCAACATGGTTGTCTTTCTCAACAAGCAAGACCAGGTGGACGATGAGGAGCTTTTGCAGCTTGTGGAGCTTGAGGTTCGTGAGCTTCTGTCCTCATATGAGTTCCCCGGTGATGACATTCCTATTATTTCCGGTTCTGCTCTGTTGGCCTTGGAAGCTTTGATGGAAAATCCCGCAATCAAGCGTGGTGATAATGAGTGGGTGGATAAGATTTATCAACTTATGGATTCTGTGGATAGTTACATTCCCATCCCACAGCGCCAAACTGATCTACCCTTCTTACTTGCGGTGGAAGATGTGTTTTCAATCACTGGTCGTGGAACGGTGGCCACAGGGCGTGTTGAGAGGGGAACCATTAAGGTTGGAGATACGGTTGACCTTGTTGGTATCAGGGAAACTAGGAACACTACTGTGACTGGTGTGGAAATGTTCCAGAAGATTCTCGATGAGGCGATGGCTGGGGACAACGTGGGATTGTTGCTTAGGGGTATTCAGAAGGTCGATATTCAGAGAGGGATGGTTTTGGCCAAGCCTGGAACCATCACACCACACACAAAGTTCAGCGCAATCGTCTATGTTTTGAAGAAGGAAGAAGGAGGGAGGCACTCACCTTTCTTTGCCGGGTACAGGCCTCAGTTCTACATGAGGACCACCGATGTCACTGGCAAGGTTACTCAAATCATGAATGACAAGGATGAGGAATCAAAGATGGTTATGCCTGGTGACCGTGTTAAGATGGTGGTTGAACTGATCCAGCCCGTGGCTTGTGAACAGGGAATGAGGTTCGCTATTAGAGAAGGAGGGAAGACCGTCGGAGCCGGCGTTATCCAATCTATAATTGAGTAA 1131 0.5093 MALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSALLALEALMENPAIKRGDNEWVDKIYQLMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGDTVDLVGIRETRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKVDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTQIMNDKDEESKMVMPGDRVKMVVELIQPVACEQGMRFAIREGGKTVGAGVIQSIIE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00151 376 CDD EFTU_III 277 371 - -
Aip03g00151 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 196 IPR027417 -
Aip03g00151 376 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 18 33 IPR031157 -
Aip03g00151 376 Pfam Elongation factor Tu GTP binding domain 14 178 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 SUPERFAMILY Translation proteins 182 278 IPR009000 -
Aip03g00151 376 CDD EFTU_II 188 274 IPR033720 -
Aip03g00151 376 Gene3D Translation factors 315 375 - -
Aip03g00151 376 Pfam Elongation factor Tu domain 2 202 270 IPR004161 GO:0005525
Aip03g00151 376 PANTHER ELONGATION FACTOR TU-RELATED 1 376 - -
Aip03g00151 376 CDD EF_Tu 1 180 IPR041709 -
Aip03g00151 376 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 181 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 Pfam Elongation factor Tu C-terminal domain 275 374 IPR004160 -
Aip03g00151 376 PRINTS GTP-binding elongation factor signature 98 107 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 PRINTS GTP-binding elongation factor signature 61 72 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 PRINTS GTP-binding elongation factor signature 25 33 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 PRINTS GTP-binding elongation factor signature 45 55 IPR000795 GO:0003924|GO:0005525
Aip03g00151 376 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 275 375 IPR009001 -
Aip03g00151 376 PANTHER ELONGATION FACTOR TU 1 376 - -
Aip03g00151 376 TIGRFAM EF-Tu: translation elongation factor Tu 2 376 IPR004541 GO:0003746|GO:0005525|GO:0006414
Aip03g00151 376 Gene3D - 4 180 IPR027417 -
Aip03g00151 376 Gene3D Translation factors 183 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00151 Aip-Chr3 1483893 1486857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00151 17 374 Eukaryotic Initiation Factors Gene Family AT5G60390 31.105 2.19e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00151 K02358 - twl:119984823 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00151 03 1483893 1486857 Aip03g00151 03 1483893 1486857 ECH