Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00144 ATGGAATCTGGTGGAGCTAATAACTTCTACTCAGTTGATGATGAGTTCAGATTGGATACCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCACGGATTGGTGAAGGGGCTCATGCCAAAGTCTATGAGGGAAAATACAAAGACCAGGCTGTTGCTATCAAAATTCTACACAAAGGAGAGACTCCGGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTCGCCATGTTGTCTAGAGTGCAGCATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACTGAGCTCTTGTTGGGAGGAACACTGCGGAAGTATTTGCTTAACATGCGACCGAAATGTTTGGAAAGACATCTTGCCATTGGTTTTGCGCTTGATATTGCGCGCGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGATAACTTGCTTTTGACCAAAGACCAAAAAATAGTCAAGCTTGCAGATTTCGGCTTAGCAAGAGAAGAATCATTAACTGAGATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTCGATGCGTATAGCTTCGCAATCGTGTTGTGGGAGCTCATACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGTGCAGAGAATCTTCCTGAGCAATTGGCCGAAATCCTAACTTTGTGCTGGCAAGAGGATCCAAACGCCCGACCCAACTTCACTCGGATAATCCAGATGCTCCTGAATTATCTTTACACCATTGCGCCGCCAGAACCCATGATTCCTTCAAGAATATTCACTTCCGAGAACACTGTCTTGCCACCAGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACAGATGAAACCAGGCTTAATAGTTTTCTTTGCTGCTTTAGCCAGTGTTATTAA 1068 0.4616 MESGGANNFYSVDDEFRLDTKWLIDPKHLYVGPRIGEGAHAKVYEGKYKDQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLERHLAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTKDQKIVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEQLAEILTLCWQEDPNARPNFTRIIQMLLNYLYTIAPPEPMIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETRLNSFLCCFSQCY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00144 355 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 330 - -
Aip03g00144 355 ProSitePatterns Protein kinases ATP-binding region signature. 35 56 IPR017441 GO:0005524
Aip03g00144 355 SMART serkin_6 29 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00144 355 MobiDBLite consensus disorder prediction 316 339 - -
Aip03g00144 355 CDD STKc_MAP3K-like 35 289 - -
Aip03g00144 355 MobiDBLite consensus disorder prediction 324 338 - -
Aip03g00144 355 PANTHER SERINE-THREONINE PROTEIN KINASE 5 330 - -
Aip03g00144 355 PRINTS Tyrosine kinase catalytic domain signature 105 118 IPR001245 GO:0004672|GO:0006468
Aip03g00144 355 PRINTS Tyrosine kinase catalytic domain signature 143 161 IPR001245 GO:0004672|GO:0006468
Aip03g00144 355 PRINTS Tyrosine kinase catalytic domain signature 217 239 IPR001245 GO:0004672|GO:0006468
Aip03g00144 355 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Aip03g00144 355 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Aip03g00144 355 Pfam Protein tyrosine and serine/threonine kinase 32 289 IPR001245 GO:0004672|GO:0006468
Aip03g00144 355 ProSiteProfiles Protein kinase domain profile. 29 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00144 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Aip03g00144 355 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Aip03g00144 355 Gene3D Transferase(Phosphotransferase) domain 1 110 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00144 Aip-Chr3 1427057 1429851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00144 16 355 MAP Kinase Kinase Kinase AT5G50180 78.824 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip03g00144 PK_Tyr_Ser-Thr 6.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00144 - - gmx:100796593 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00144 03 1427057 1429851 Aip03g00144 03 1427057 1429851 ECH