Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00141 ATGGAAACGAGTCCTGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGATCCTCCCACGCGCTACCGACGGCGAGCTCCGTTACATCGGTGGCCACACCAGAGTCCTCACCGTGGACCGTTCCATTTGCTTCTCAGACTTGTTGGTAAAGCTAGGAGAGTTGTGCGGTTCGTCTGTGACGTTACGGTGTCAATTGCCGAACGGAGACTTAGAAACCTTGATCTCCGTCACCAACGACGAAGATCTGACGCACATAATCGAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAAGATCAGAGCCGTGCTGTTTCCGCCAAAATCGTCTAAGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTTGTCTTCCTCTGCTTCATCCAGCGCCAGTCACTCGCCAGCAAGATCTCCGTACACCTCCGCAGAATCGCTGCCGCATGTGGCGGCGTATCGCGTCGTCCGCCAAAGCCGTCCTGTCCCGATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTAGAAGGAAGCCCTAGGTTTCTTTATTACGGATCTCGCTTCAGTAATTACTGCCATTGA 597 0.5477 METSPGRTIKLLCSYGGKILPRATDGELRYIGGHTRVLTVDRSICFSDLLVKLGELCGSSVTLRCQLPNGDLETLISVTNDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKSSKKVSPATSSPSLSSSASSSASHSPARSPYTSAESLPHVAAYRVVRQSRPVPIRNGSAKACCYNGQLEGSPRFLYYGSRFSNYCH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00141 198 CDD PB1_UP2 12 109 - -
Aip03g00141 198 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Aip03g00141 198 PANTHER PB1 DOMAIN PROTEIN 1 198 - -
Aip03g00141 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 198 - -
Aip03g00141 198 MobiDBLite consensus disorder prediction 115 144 - -
Aip03g00141 198 SUPERFAMILY CAD & PB1 domains 25 118 - -
Aip03g00141 198 Gene3D - 30 107 - -
Aip03g00141 198 MobiDBLite consensus disorder prediction 113 145 - -
Aip03g00141 198 SMART PB1_new 23 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00141 Aip-Chr3 1401419 1403897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00141 9 116 MAP Kinase Kinase Kinase AT1G04700 46.296 5.22e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00141 - - gmx:100797123 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00141 03 1401419 1403897 Aip03g00141 03 1401419 1403897 ECH