Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00133 atgacacatgcagcggtggGGGTAGAGGATGGACTAGACCCAGGTGTTGACTCAGATGGCACCAATTCTTGGCACTCGGAGGAGATGAAGACGCCTCCAAACTCAAAAGATGAGCTGGAGGAAGGAAATGAATCTGAAGAGGCAAGTCCGCTGTTTATGGAGGGTgcaagGGTAAGACCTTTGATGTTATGCTTGTCTGAATTAATTGTGAGATCATTGGATATTGATGccgctgccgccgaggcgactgagaagaagaaaaatgatgaagtacatcctctgcctgagcatcctgttcagcagccccaagacgattctggccaagcagatttggatcctggaccaaaaagaccatcgaagctgtcaccaagaagacgattctctatgcttccaaccgcaccaacagtgaatcccttgcaggTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGGGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTGGTTTCGGAGTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATGTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCTTATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTCGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCAATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGCGGAAAAAAGAGATGGCTATTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAACGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAACTGGTTCAATGCGAATAACCTTTCATGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCAACGAATACATAGAAGACATCAAGGATGTATGTGAGGATTTCGAAGGTCTTTGCCAGCGCAATCTTGCTGCTAACACGGGGATGAACTTTTATGACTTCTTTACTTTCATATCACGCTTCACCTTGGCCAACATTGTCTTGCTTTGTTATATAAATGGAAGACATGGAAATATCACTCAAATCTCATCAACAATAGCTCAGCATTTATTGATGAATCTTGGATCCATAAGGAAGGTTGCATCGGAGATGAAAGACAGGCATGCTCTAAAAGGAAATCAGGATCGCGCTGTGGACATTATAGAAACACTTGAAGATCCTAGCTTTTGCAAATTGTGCATGGATATAGGAAGAACATATGCAATGATACATGAAGAGTCTCATTTGTCCTTTGATTTCGAGAGAGCTTCAGCTGGTGAAATAGTGGATCTCACTGTTTTGAAAGCATACACTTCATCTCAGTTCTACACACCTGAAGATCTTGTTGAATTTATAGACAATGCTGTTGCAGAACATGAAACCAATGCTTCCTTGATGTCAAGCTCTCAATGTTTCTGTAATGAGAGAGAGAAAAAGAGTTGTTTGGTGAAGTCCTAG 1770 0.3497 MTHAAVGVEDGLDPGVDSDGTNSWHSEEMKTPPNSKDELEEGNESEEASPLFMEGARVRPLMLCLSELIVRSLDIDAAAAEATEKKKNDEVHPLPEHPVQQPQDDSGQADLDPGPKRPSKLSPRRRFSMLPTAPTVNPLQVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSEFIGRCLQDVEGSAVQCSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHANVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLERMQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNANNLSWVWNLLLRDYNEANEYIEDIKDVCEDFEGLCQRNLAANTGMNFYDFFTFISRFTLANIVLLCYINGRHGNITQISSTIAQHLLMNLGSIRKVASEMKDRHALKGNQDRAVDIIETLEDPSFCKLCMDIGRTYAMIHEESHLSFDFERASAGEIVDLTVLKAYTSSQFYTPEDLVEFIDNAVAEHETNASLMSSSQCFCNEREKKSCLVKS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00133 589 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 140 563 - -
Aip03g00133 589 MobiDBLite consensus disorder prediction 1 51 - -
Aip03g00133 589 MobiDBLite consensus disorder prediction 84 126 - -
Aip03g00133 589 Pfam Cupin-like domain 167 373 IPR041667 -
Aip03g00133 589 ProSiteProfiles JmjC domain profile. 217 389 IPR003347 -
Aip03g00133 589 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 140 563 - -
Aip03g00133 589 Gene3D Cupin 133 373 - -
Aip03g00133 589 SMART cupin_9 209 389 IPR003347 -
Aip03g00133 589 SUPERFAMILY Clavaminate synthase-like 149 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00133 Aip-Chr3 1239614 1248407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00133 210 381 Glycosyltransferase AT1G78280 23.529 8.74e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip03g00133 Cupin_8 6.5e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00133 - - aip:107632417 894.804