Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00124 ATGGGTTTCCGTTTACCTGTTATTCGAAGGGTATCATCATTCTCAGCTAGCCAAGTAGCTTCAAAATCTGTGGAACTCCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAATCAAAAGCGTTTTGTGATCCCCATATCATACTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGCTGAAGAAGAATTTGGATATGATCATCCCATGGGAGGTCTCACTATTCCTTGTAGTGAACATGTCTTCCAACGAATCACTTCTCACTTGAATGGGCTATAA 282 0.4113 MGFRLPVIRRVSSFSASQVASKSVELPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQRITSHLNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00124 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 91 IPR003676 GO:0009733
Aip03g00124 93 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Aip03g00124 93 PANTHER AUXIN-INDUCED PROTEIN 6B 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00124 Aip-Chr3 1109295 1109576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00124 25 84 Calmodulin-binding Proteins AT3G43120 53.333 1.24e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00124 K14488 - gmx:100816803 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00124 03 1109295 1109576 Aip03g00124 03 1109295 1109576 ECH