LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g00120	ATGAAGTATAGAATGAGGGCTAATAATATCATATCAGGTATCCGATTGCAGCGTCAACAAGTCAAAGTAGGCTCTAGAATGGAGGCGTTGATGAAAGGTGTGAAAGTAGTGATTCAATTTTTTATGGAAGAGGTGCCACGTGTAAGTAGAAGTTGTTGCAGGGACTCAAAACCCCTCCCTACAACTGAAACGGCGTCGTTGCATTGGGTTAACTCAAATGCAACCTACTCCCTGACCCAATCTCTCTCTCTCTCTGAAAAAACAAAAATCAGCCTTCATGAGCTCCTCCGACCTCTCCTCTCTCTGGCTCCCTCCGCCACAATCCGCCGCCTCCACCTCCACCTCCGCAGCACCACCACCACAGCAACAACAACCACCTCCTCCGCCGCCGTTCAACCAGGAAACCCTTCAGCACTGACTCCAAGCCCTAATCGAAGGCGCAAGAGAGAGCTGGACCTATGCAATCTTCTGGCAGTGCTCCTACGACTACTCCAACGGCCTCACACTCTTAGTTCTGCAGATCAAGGAGAGAACGATCCTTCTTCGTTGTGGCTCAATGACCCTTCTTCTTCGGCTGGTGGGATCGAAATGGTTGCCAACAACAAAACGGTGCCGGTTGTATCCAATCCTGGCTCCTCCAGTGTGGTAACCAAAGCTCCAAAGAATCTGCAACAGAATCAGGGATTTGTGCTGAAGGAATTGAATTTCTCGAGCTCGTTGAAGCTGGAATCTGGTGAGATTCTGAGTTTCGGAGAGAATAAGAAGGGTTCTTATGGTGTAAACAGTAATAACAGTGGAAACAATTTGTTCTCTGTTCAGTCTCAGTCGCAGTTTGTCTCCGATGAGAACAAGAAGAGAAGATCCCCTACTTCGCGGAGCAGCATTGAGGATGGAATACTGTCTTTTACTTCCGGCGTGATCTTGCCGGCTTCCAATGTGAAGTCCGGTGGTGGCGAAGGCGGAGATTCGGATCATTCGGATTTGGAAGCTTCTGTGGTGAAGGAGGCCGTTGAGCCGGAGAAGAGGCCGCGAAAGAGAGGGAAGAAGCCGGCAAAACGGAAGGGAGGAGCCGCCCAATGCAACGACGCCGTTTCAGTTGCAGGGAGGGGGTTTTGA	1116	0.5018	MKYRMRANNIISGIRLQRQQVKVGSRMEALMKGVKVVIQFFMEEVPRVSRSCCRDSKPLPTTETASLHWVNSNATYSLTQSLSLSEKTKISLHELLRPLLSLAPSATIRRLHLHLRSTTTTATTTTSSAAVQPGNPSALTPSPNRRRKRELDLCNLLAVLLRLLQRPHTLSSADQGENDPSSLWLNDPSSSAGGIEMVANNKTVPVVSNPGSSSVVTKAPKNLQQNQGFVLKELNFSSSLKLESGEILSFGENKKGSYGVNSNNSGNNLFSVQSQSQFVSDENKKRRSPTSRSSIEDGILSFTSGVILPASNVKSGGGEGGDSDHSDLEASVVKEAVEPEKRPRKRGKKPAKRKGGAAQCNDAVSVAGRGF	371

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g00120	371	MobiDBLite	consensus disorder prediction	118	146	-	-
	Aip03g00120	371	MobiDBLite	consensus disorder prediction	311	371	-	-
	Aip03g00120	371	PANTHER	MYC	216	353	IPR045084	GO:0003700\|GO:0006355
	Aip03g00120	371	MobiDBLite	consensus disorder prediction	320	344	-	-
	Aip03g00120	371	PANTHER	TRANSCRIPTION FACTOR MYC2	216	353	-	-
	Aip03g00120	371	MobiDBLite	consensus disorder prediction	274	296	-	-
	Aip03g00120	371	MobiDBLite	consensus disorder prediction	118	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g00120	Aip-Chr3	1085819	1087481	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g00120	152	351	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G32640	39.130	4.03e-21	93.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g00120	K13422		-	vvi:100250607	140.198