Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00113 ATGGAATCCAGTTCGTTCATAATGATGCCAAGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATAGAAAGGATATGACTCAGGATTCAACGTTTGAATTCGAGAGGATGCGGAACAAATTGGAGAGATATGACAGGAACCTTATTGAAAATGTGTTTAAGGCCATTCCTAAGATTGATAAAATCAGAGTCATCAAAGAGGAGAGACACCATAAGAATAGGTCCTTGCTTGAATCTTCTATAGGttccatagaggagaaagacgcagcgtttacccagttgaatggtttagccttccttctcctttag 354 0.3192 MESSSFIMMPRSKCHKNFKMKRNPRKVKWTKAYRRVHRKDMTQDSTFEFERMRNKLERYDRNLIENVFKAIPKIDKIRVIKEERHHKNRSLLESSIGSIEEKDAAFTQLNGLAFLLL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00113 117 PANTHER 60S RIBOSOMAL PROTEIN L24 8 96 IPR000988 -
Aip03g00113 117 Pfam Ribosomal protein L24e 11 43 IPR000988 -
Aip03g00113 117 PANTHER RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED 8 96 - -
Aip03g00113 117 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 34 - -
Aip03g00113 117 Gene3D Ribosomal protein L24e 3 46 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00113 Aip-Chr3 1018294 1018871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00113 11 89 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.620 1.01e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00113 K02896 - gmx:100778077 149.828