Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00104 ATGAGTACTACTAATGCAAGGAACATGAGATGGAATAGAATGGACCAATGGCTTGTAATTTCAGCTATTCTTTTACTGCAAGATTTTCTGTTCCTCTCTCAGATACTTGCTGAGACCACAACCTCTGTGCATATTGTATACATGGGGGATAAGATATTTGATAATCCAGACACTACTAAAAAGGTTCACCACAAAATATTATCTTCACTTCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCATGGATTTTCAGGGTTTGCTGCAAGGTTAACAAAATCTCAAGCAGAAGAAGTAGCAAAATTTCCGGGGGTAGTTTCTGTCATTCCGAATCGGATACACAAACTTCACACAACAAGAAGTTGGGACTTCCTTGGTATCCATCATTCATCTTCAAACACTGTTTCCAATGAAATCAACTTAGGTGAAGGAACCATAATAGGTGTCATTGACACAGGAATCTGGCCAGAGTCTGTGAGTTTTAACGACGAAGCGATGGGAAAAATCCCATCAAGGTGGAAAGGAGTTTGTGAAGTGGGAGAGCAATTCAGTTCCAAAAACTGCAACAAAAAGATAATAGGTGCTAGATGGTTCTTGAAAGGAATATCTCATCATGCTAAGAAGCTGATCCTTGGAAATGAAAGCAGCGAATATCTCTCGGCTCGAGACGCTATAGGCCATGGCACTCACACAGCTTCCACAGCAGCAGGGTACTTTGTAGAAAATGCAAACTACAGAGGACTTGCTTCTGGCATAGCCAGAGGAGGAGCTCCACTTGCACACTTAGCTATATACAAGGCATGCTGGGACATTTCTGTTGGAGGTTGTTCTGGTGCAGATATCCTTAAGGCTTTTGACAAGGCAATACATGATGGAGTAGACATTTTAACAGTTTCTCTTGGCCTTAACATTCCTTTGTTCTCATATGTTGATCAGCGCGACGCCATAGCAATTGGTTCCTTTCATGCAACTGCTAAGGGAATCACAGTTATATGTTCAGCTGGGAATTCTGGTCCCAACTCTCTAACAGTTTCAAATACTGCTCCATGGATTATCACAGTTGCAGCCACCACCATAGATAGGGCCTTTCCGGCTGCGATTATTCTTGGAAATAATCTCACTCTCTGGGGGGAGTCCTTAGATGCTGGAAAGCATAGCAATGGATTTGTTGGACTAACATACTCCGAACGTGTCGCTTTAGATCCTGATGATGATACAGCTAAGGATTGTCAGTCCGGAAGTCTGAATGCTACAATGGCAGCAGGCAAAATTGTGCTATGCTTTTCGCTATCCGAGGAACAGGATATCATCTCTGCATCGCTTGCTGTAAGGGAAGCTGGAGGAGTTGGAATAATATTTGCACAATCTCATGAAGATGGACTCAACCAATGTGGCTCCTTTCCATGTGTTAAGGTAGATTATGAAGTAGGGACACAGATAGTATCCTATATTAGAAGAGCAAGGTTTCCAACTGCAAGCCTAAGTTTTCCAAAGACTGTTATTGGAAAATGGACTTCTCCAAGAGTTGCATCATTCTCATCAAGAGGACCTAGCACTATGTCTCCTTCTGTGTTAAAGCCAGACATAGCAGCACCAGGTGTAGACATTTTGGCGGCATTTACACCAAAAGGCACCACAAAGAATAATGCATTTCAATTCTTATCTGGAACTTCAATGTCATGTCCTCATGTGGCTGGAATAGCAGCTCTCATCAAATCCAAACACTCAACATGGTCTCCTGCAGCCATAAGATCAGCTATGGTTACAACAGCATCTCAAATTGGAAATGATGGAAGCTTTGTATCTGAAGAGGGTTCCACACTTAAGGGAGCTGATCCGTTCGACATTGGTGGCGGCCATGTAAACCCCATCAAAGCAATGGATCCAGGGCTCATATATGATATCATCACTGAGGATTATATCCAGTTCCTATGTTCCATGGGATATAGTAGTTCATCCATTAGAAAAGTGACCAAGACAACAAGAAGTTGTGAAAAACAGAACTACCAAGGACTGAACCTTAACCTTCCTTCCATATCAGTTCCAAACTTGAAGAAGGCTGCAAAAGTAACAAGAACAGTGACAAATGTAGGAAACATAACTGCAGTTTATAGAGCTATAGTGAAGGAACCATATGGCATAGAAGTAAGAGTTGAACCTCAAATTCTGAGTTTCAACTCAGACACCACAATACTTTCCTTTAGTGTCATGCTTCATTCAACTCAAAAGGTTCATAATGGTGATTACAGATTTGGGAGCCTAACTTGGACAGATGGCAAGCATTCTGTGAGGACCCCACTAGCTGTGAGGACCATAAAGTTTGAATCATAA 2346 0.4177 MSTTNARNMRWNRMDQWLVISAILLLQDFLFLSQILAETTTSVHIVYMGDKIFDNPDTTKKVHHKILSSLLGSKEAAKNSILYSYKHGFSGFAARLTKSQAEEVAKFPGVVSVIPNRIHKLHTTRSWDFLGIHHSSSNTVSNEINLGEGTIIGVIDTGIWPESVSFNDEAMGKIPSRWKGVCEVGEQFSSKNCNKKIIGARWFLKGISHHAKKLILGNESSEYLSARDAIGHGTHTASTAAGYFVENANYRGLASGIARGGAPLAHLAIYKACWDISVGGCSGADILKAFDKAIHDGVDILTVSLGLNIPLFSYVDQRDAIAIGSFHATAKGITVICSAGNSGPNSLTVSNTAPWIITVAATTIDRAFPAAIILGNNLTLWGESLDAGKHSNGFVGLTYSERVALDPDDDTAKDCQSGSLNATMAAGKIVLCFSLSEEQDIISASLAVREAGGVGIIFAQSHEDGLNQCGSFPCVKVDYEVGTQIVSYIRRARFPTASLSFPKTVIGKWTSPRVASFSSRGPSTMSPSVLKPDIAAPGVDILAAFTPKGTTKNNAFQFLSGTSMSCPHVAGIAALIKSKHSTWSPAAIRSAMVTTASQIGNDGSFVSEEGSTLKGADPFDIGGGHVNPIKAMDPGLIYDIITEDYIQFLCSMGYSSSSIRKVTKTTRSCEKQNYQGLNLNLPSISVPNLKKAAKVTRTVTNVGNITAVYRAIVKEPYGIEVRVEPQILSFNSDTTILSFSVMLHSTQKVHNGDYRFGSLTWTDGKHSVRTPLAVRTIKFES 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00104 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 24 780 - -
Aip03g00104 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 122 IPR037045 -
Aip03g00104 781 CDD Peptidases_S8_3 119 597 IPR034197 -
Aip03g00104 781 ProSiteProfiles Serine proteases, subtilase domain profile. 126 632 - -
Aip03g00104 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Aip03g00104 781 Gene3D Peptidase S8/S53 domain 149 645 IPR036852 GO:0004252|GO:0006508
Aip03g00104 781 Gene3D - 365 506 - -
Aip03g00104 781 PANTHER PEPTIDASE S8 24 780 - -
Aip03g00104 781 Pfam Peptidase inhibitor I9 43 122 IPR010259 -
Aip03g00104 781 SUPERFAMILY Subtilisin-like 121 636 IPR036852 GO:0004252|GO:0006508
Aip03g00104 781 Gene3D - 649 777 - -
Aip03g00104 781 Pfam Subtilase family 147 599 IPR000209 GO:0006508|GO:0008236
Aip03g00104 781 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Aip03g00104 781 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Aip03g00104 781 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Aip03g00104 781 CDD PA_subtilisin_like 372 499 - -
Aip03g00104 781 Pfam Fibronectin type-III domain 678 774 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00104 Aip-Chr3 934922 939118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00104 18 776 Subtilisin-like Serine Gene Family AT4G10540 48.631 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00104 - - gmx:100792709 1260.36