Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00057 ATGGACTTTCAAGTCGTTGTTCTCGCCGGCGGGGTCTCCAAGAAACTCCTCCCTCTCGTTTCCAAGGAGATTCCGAACGCCTTGCTTCCGGTGGCGAACCGGCCTGTTATCTCTTACGTGCTCGAGCTATTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTAGTCGAAGGCGAAGATGCTGCTCTTAATGTTGGGGGCTGGATATCGGCGGCTTATGCTGATCGCCTCCATGTCGAGGTTGCTGCAGTTCCCGAGGATGTAGGAACTGCTGGTGCTATTCGAGCGATTGCACACCACCTAACTGCTAAGGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCAGTTGCAGCTACTCATAGGCGGCATGATGCTGTTGTCACTGCTATGCTTTGTTCTGCTCCTGTAAGTGGGCCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATAACTTGATAGGATTGGATCCCACACAACAGTTCTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTCCGAGTTCAGAAGAGCATACTCCGTGCAGCTGGCGAGATAGAAATCAGAGCTGATTTAATGGATGCTCACTTGTATGCATTCAAAAGATCAATTTTACAAGAAGTTTTAGATCAAAAGGGTACATTTCATAGCCTAAAACATGATGTATTGCCATATCTTGTCCGAAGCCAACTGAAATCAGAAGCATTACTGAATGGCGTAGCACAAGTAGAAGAAAATGGAACCGAGAAGATTATTGCTCAAAGCAATCAACAAATGTTATCACAAATACTTGCTAATGCATCTGAGCGGACGTTTCATCAACGATATGCTTTGAGTCCTAATGGCACTTCTTTCAGAAAAACTCATAAATGTTGTGTTTATATTGCCGGAAGCAACAGGTATTGTGCTCGCTTGAATTCTATACAAGCATACAGCGATATAAATCGAGATGTGATAGGAGAAGCTAATCATTTGTCAGGGTATTCATTCTCTGCTCAAAATAACATTATCCATCCTTCAGCAGAGCTTGGAGCAAAAACAACTGTAGGACCACATTGTATGCTTGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCACTGCAGGATAGGTGCAAATGTTAAGGTTGTTAATTCAATAGTTATGAATCATGTTACCATTGGTGACGGTTGTTCAATCCAAGGTTCAGTTATCTGCAGCAACGTACAGCTACAAGAACGTGCCGTACTAAAAGATTGTCAAGTCGGAGCAGGTTTTGTGGTTGCTGCTGGTAGTGAGTGCAAAGGGGAGGTCTTAGCTAAGAAATGA 1377 0.4452 MDFQVVVLAGGVSKKLLPLVSKEIPNALLPVANRPVISYVLELLELSNLKDLIVVVEGEDAALNVGGWISAAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESGSSGGKDKTKKPGRYNLIGLDPTQQFLLHIATGAEVEKDLRVQKSILRAAGEIEIRADLMDAHLYAFKRSILQEVLDQKGTFHSLKHDVLPYLVRSQLKSEALLNGVAQVEENGTEKIIAQSNQQMLSQILANASERTFHQRYALSPNGTSFRKTHKCCVYIAGSNRYCARLNSIQAYSDINRDVIGEANHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSIVMNHVTIGDGCSIQGSVICSNVQLQERAVLKDCQVGAGFVVAAGSECKGEVLAKK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00057 458 MobiDBLite consensus disorder prediction 141 161 - -
Aip03g00057 458 Gene3D Hexapeptide repeat proteins 351 455 - -
Aip03g00057 458 Pfam Nucleotidyl transferase 6 147 IPR005835 GO:0009058|GO:0016779
Aip03g00057 458 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 458 - -
Aip03g00057 458 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 350 IPR029044 -
Aip03g00057 458 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 424 IPR029044 -
Aip03g00057 458 CDD eIF-2B_gamma_N 3 220 - -
Aip03g00057 458 CDD LbH_eIF2B_gamma_C 369 449 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00057 3 449 Eukaryotic Initiation Factors Gene Family AT4G18300 22.199 1.93e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00057 K03241 - gmx:100799460 774.622