Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00047 ATGCAAGAAACCCAACACTTCAACTCATCAGAAGATGTTGAAGAAAAACTAGTGGCTCAAAAGCCCCAAAAGGTACTCCATCTGCGACAATGTCTTGTTCCAATCTCACTATGTCGGGTGTCTTCAAAACCTTCTCTTTCTGATGCCTCCAACCTCTCTTTCCATTCTGTTCTCAACCCTTTTCAGCTCCCTTCACAAAATTCACCCTCATGCAGCCTCTCACGTTCTTCTGTCACCCCAGTACAGTGTGGTCTCAGAGAGCTCAGAACCCGCATTGAATCTGTCAAAAACACACAGAAGATCACAGAAGCAATGAAGCTTGTTGCAGCCGCTAAAGTCAGAAGGACTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCAGAGACTCTTGTTGAGGTCCTCTACAACATCAACGAGCAGCTCCAAACTGAGGACATTGATGTCCCTCTCACAAAAGTTAGGCCAGTGAAGAAGGATCTTGGTCTTGACTACACTATCATTAGTGTTGGCAAGAAGGGTAACTCTTACTTCCTCCGTAGACCTTACATACCAGTTGATCGGTTTCTAGAAGAAGGATCGCTCCCAACTGCGAAAGAGGCTCAGGCAATTGCTGATGATGCCTTCTCGCTGTTTTCAGTGAAGAGGCTAACAACAAAGGAAGGAAAGCTAACTGTAGAGAGGAATGCTGTGAGGACAAAGACAGAAGACTATTCACCAATTTTGGAGTTTGAACAAGATCCTGTTCAGATCCTTGATGCTCTCTTGCCGCTTTATCTCAACAGCCAAGAGAGCACTTCAAGAATCACTTGCAAGTGA 816 0.4498 MQETQHFNSSEDVEEKLVAQKPQKVLHLRQCLVPISLCRVSSKPSLSDASNLSFHSVLNPFQLPSQNSPSCSLSRSSVTPVQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRTQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVPLTKVRPVKKDLGLDYTIISVGKKGNSYFLRRPYIPVDRFLEEGSLPTAKEAQAIADDAFSLFSVKRLTTKEGKLTVERNAVRTKTEDYSPILEFEQDPVQILDALLPLYLNSQESTSRITCK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 215 262 - -
Aip03g00047 271 Pfam ATP synthase 85 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip03g00047 271 Gene3D - 157 264 - -
Aip03g00047 271 Gene3D ATP synthase, gamma subunit, helix hairpin domain 83 154 - -
Aip03g00047 271 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 84 262 IPR035968 GO:0015986|GO:0045261|GO:0046933
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 36 158 - -
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 158 211 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 215 262 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 36 158 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip03g00047 271 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 158 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00047 Aip-Chr3 449447 452900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00047 60 262 Primary Pumps ATPases AT1G15700 44.792 1.24e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00047 K02115 - adu:107486787 373.244