Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00037 ATGATGTCAAAGATGAAAGCATTGAGAGGAGTGTTATTGTTTGGTGTCTCCACCGCTCGTTTTCATGGCTATCCTTCACTCCCTCCCTCCCTCTCTCAACCTACTTTCAACACAAAAACTAGTCCAAATGAGAATTTGGAGAGTAGAAAAGTTCCAACTTCGGTGGCCGTTGGCGTCGCGCATGGCCTTCTTCAAGCCGGACATCGCTATTTGGATGTCAGGACCATTGAAGAGTTCAGTGCAGGTCACACTCCAGGTGCCATTAACATCCCTTACCTTCACAAAATTGGAGAAGATATGACAAAAAACGCTGATTTCATTGAACAAGTCTCATCCCAATTCAGCAAACATGACAAAATCGTTGTTGGGTGTAAGAGCGGTAAGAGGTCTAAGATGGCTGCTACAGACTTATTAGATGCTGGATTTAGTGGAGTTAAAGATGTGGCTGGTGGTTATGATGATTGGACCCAAAATGGACTTCCAACACAAATATAA 495 0.4364 MMSKMKALRGVLLFGVSTARFHGYPSLPPSLSQPTFNTKTSPNENLESRKVPTSVAVGVAHGLLQAGHRYLDVRTIEEFSAGHTPGAINIPYLHKIGEDMTKNADFIEQVSSQFSKHDKIVVGCKSGKRSKMAATDLLDAGFSGVKDVAGGYDDWTQNGLPTQI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00037 164 Gene3D - 38 163 IPR036873 -
Aip03g00037 164 ProSiteProfiles Rhodanese domain profile. 64 164 IPR001763 -
Aip03g00037 164 Pfam Rhodanese-like domain 69 157 IPR001763 -
Aip03g00037 164 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 51 162 IPR036873 -
Aip03g00037 164 SMART rhod_4 55 161 IPR001763 -
Aip03g00037 164 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 32 163 - -
Aip03g00037 164 CDD RHOD 71 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00037 Aip-Chr3 361746 365561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00037 54 161 Sulfurtransferasese or Rhodanese AT5G66170 48.182 7.84e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00037 - - pvy:116146112 178.718