Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00020 ATGGGAAGGTCTCCTTGCTGTAGCCATGAGCATGTGAGGAAGGGTGCTTGGTCTCTTGAAGAAGATGAGAAGCTCAAAGCATACATTCACACTTATGGCCCTGGAAAGAGTTGCAGACTGAGACAACGAAATCAAGAACTACTGGAACTCATCTCTCAACAAGAACAACCACTTATTACACACTCCTCTGTGCCATGCTTACTCAACAAAATGGCCAATTCCTTCTCTGGCAACCAAGCTGCAAAAGCACTCTTCTCCAAGCTAATGAATGATGACAACATTGCAGAAGCTCCTGAATTTGTTCAAATGTTAAGACGAAAGTGA 324 0.4352 MGRSPCCSHEHVRKGAWSLEEDEKLKAYIHTYGPGKSCRLRQRNQELLELISQQEQPLITHSSVPCLLNKMANSFSGNQAAKALFSKLMNDDNIAEAPEFVQMLRRK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00020 107 CDD SANT 16 43 IPR001005 -
Aip03g00020 107 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 36 IPR017930 -
Aip03g00020 107 Gene3D - 7 54 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00020 1 44 MYB Transcription Factor Family AT2G16720 49.153 5.71e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00020 K09422 - gmx:100818639 60.077