Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00017 ATGTTCGGAGAAACAGATCCGATGGACAAAGATAAAGAGATGGAGACGGTGGCCACTGCTAAAGTCCGACGCATGGACTCTTTCATCAACTTGGAAGCTGGACGTGTTACCATGAGTGAAACACATGGCTCTAAGGTTAGCTGGAAGACAACGTTAAGTTTGGCATTTCAAAGCGTAGGGATTGTTTATGGTGATATCGGCACATCTCCGCTTTATGTGTATTCGAGCATTTTTACCAGTGGAATAAAAAACAACGATGATATTCTTGGCGTCTTATCCCTCATCATCTATACCATTCTGCTGGCGAACGACAACGGCAATGGTGGAGCATTTGCATTGTATTCGCTGATATGCAGACACGTAGACGTGAGTTTGATTCCAAATCAACAACCAGAAGACAGAAAACTTTCTAACTACAAGCTGGAACTACCGTCTAGTCAGCTCAAACAATCCCAAACACTGAAGCAGATGCTTGAGAACAGTCAGTTTGCTCGTTTTCTTCTTTTGCTTGCAACCATTCTGGGAACTTCCATGGTCATAGGAGACGGCTTTCTTACTCCCTCAATGTCAGGTGTGTATATAGATCCATATACTCTCTCTCTCTCTCTCTATATATATATAAACATGTTGTTCATTTTACATGCAGTCCTTTCTGCCGTAAGTGGGATCAGTAAATCACTCGGTCAAGATGCTACTGTGGGAATCGCTATAGGAATCTTAATTATTTTATTTTCTTTGCAAAGATTCGGTACAGATAAAATGGGATTCTCATTTGTACCAATTATTTTAGTGTGGTTTTTACTCATAGCGGGAATTGGTATCTATAATTTGTTCAAATATGATATCAGAGTGTTGCGTGCTTTCAATCCAAAATATATAGTTGATTACTTCAAACGCAACGGTAAGCAAGGATGGCTATCACTTGGTGGAGTCTTTCTATGCATAACAGGATCTGAAGCCATGTTTGCAGACTTGGGTCACTTTAATGTACGAGCAATTCAAATCAGCTTCACTTTGATTACATGTCCTGCAATATTGTGTGCATATACTGGGCAAGCTGCATTTCTTCGAAAGTTTCCTGAAAAAGTGGGTAATACTTTCTATGAAAGTCTACCAAATCCCATATACTGGCCAACATTTGTGGTGGCTGTTGGTGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATCATATCGCAGGCCCTGAGTCTAGGTTGTTTCCCACGAGTTAAGGTTGTGCATACTTCCACTAAGCACGAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATTGGAAGCATTATTATGTGTGTTGCCTTCAAAACCACAGAAAAGATAAGTCAAGCATACGGGATTGCAGTTATTGGGGATATGCTTATCACAACGTGGCTGGTTTCATTAATAATGGTAGTTATATGGAAGAAGAGCATATGGCAAGCTACTATCTTCTTATTGGTATTCGGCTGCATAGAGGCTATTTATTTCTCATCTCAGATAACAAAGTTCATGGAGGGAGGCTATATTCCAATTGTGTCTTCTTTGTTTTTGACGATGATCATGGGAATCTGGCATTACGTGCATAAAGAGAGGTACATGTTCGAGCTTAGAAATAAAGTTCGCAGTGAATACATAGGAGAATTGGCCATGGATAGGGACATAAGAAGAGTTCCCGGGGTAGGGCTGCTCTATTCTGAGCTTGTGCAGGGGATTCCTCCGATATTCCCCCATCTCATAGCCTGTATGTCATCCATCCATTCAGTCATTGTCTTTGTTTCCATCAAGGTCATCCCTATCAGCCGAGTTTCTTTAGAGGAGAGGTTTCTATTTTGCCATTTGGAGCCCAGAGAATACCGAATGTTCCGTTGCGTGGTTAGATGCGGTTATAAAGATAAACTCGAGGATGCTCTTGTATTTGAATCACAGTTAATACAAAATCTCAAAGCCTTCATTCACCTAGATGAACCTGAGGTCAACTTTATCGACATGGCAATGCAAAGAGGTGTGATGTATATGCTTGGCGAAGCAGAGGTGGTGGCTCTACCAAATTCATCGTTCCTCAATAAGATAGTTGTCAACTATGCTTATACTTTCTTAAGAAAGAACTTCCGCCAAGGAAACCAATTGATGGCCATCCCGCGTAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2199 0.4093 MFGETDPMDKDKEMETVATAKVRRMDSFINLEAGRVTMSETHGSKVSWKTTLSLAFQSVGIVYGDIGTSPLYVYSSIFTSGIKNNDDILGVLSLIIYTILLANDNGNGGAFALYSLICRHVDVSLIPNQQPEDRKLSNYKLELPSSQLKQSQTLKQMLENSQFARFLLLLATILGTSMVIGDGFLTPSMSGVYIDPYTLSLSLYIYINMLFILHAVLSAVSGISKSLGQDATVGIAIGILIILFSLQRFGTDKMGFSFVPIILVWFLLIAGIGIYNLFKYDIRVLRAFNPKYIVDYFKRNGKQGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFTLITCPAILCAYTGQAAFLRKFPEKVGNTFYESLPNPIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHEGQVYIPEINYMFMIGSIIMCVAFKTTEKISQAYGIAVIGDMLITTWLVSLIMVVIWKKSIWQATIFLLVFGCIEAIYFSSQITKFMEGGYIPIVSSLFLTMIMGIWHYVHKERYMFELRNKVRSEYIGELAMDRDIRRVPGVGLLYSELVQGIPPIFPHLIACMSSIHSVIVFVSIKVIPISRVSLEERFLFCHLEPREYRMFRCVVRCGYKDKLEDALVFESQLIQNLKAFIHLDEPEVNFIDMAMQRGVMYMLGEAEVVALPNSSFLNKIVVNYAYTFLRKNFRQGNQLMAIPRKRLLKIGMTYEI 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00017 732 Pfam K+ potassium transporter 55 190 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g00017 732 Pfam K+ potassium transporter 215 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g00017 732 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 661 731 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g00017 732 PANTHER POTASSIUM TRANSPORTER 5 661 731 - -
Aip03g00017 732 PANTHER POTASSIUM TRANSPORTER 5 16 659 - -
Aip03g00017 732 TIGRFAM kup: potassium uptake protein 214 732 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g00017 732 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 659 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00017 Aip-Chr3 170359 173561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00017 1 732 Inorganic Solute Cotransporters AT4G13420 51.724 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00017 K03549 - gmx:100814313 919.842