Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00007 ATGGATGTTGTAGAGCGTTGTGATGAAGAAAGTGATAATGCAGAGAATGAATACGTGGATAATGCATGGAAGGAAATGAGCAAGGATAAGGGTAAGGGTAAGAAGGGCTTAAAAAGGAAGAGCATTTCTGAGTGCTTCTACATGCCCATAGCAGAAGCGTCGAGACACCTCAAGGTGGGTCTCATACATCTCAAGAGAAGGTGGAGGGACTTAGGGATTCAGAGGTGGCCTCACAGGAAGCTCATGAGTCTTCAAACCCTAATCAACAATCTGCAGCAGCAGCAGCAGCAGCAGAAGGGAGTTGATGAGGATGAGAGCAGCAGAATAAGGAGTGCCATTCACATTTTGGAGAGAGAGAAGAGCTTGTTGGAGGAAATTCCCCACTTGCAACTGGAGACCACACCAAAAGGCTAA 414 0.4662 MDVVERCDEESDNAENEYVDNAWKEMSKDKGKGKKGLKRKSISECFYMPIAEASRHLKVGLIHLKRRWRDLGIQRWPHRKLMSLQTLINNLQQQQQQQKGVDEDESSRIRSAIHILEREKSLLEEIPHLQLETTPKG 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00007 137 Coils Coil 84 104 - -
Aip03g00007 137 PANTHER PROTEIN RKD4 10 136 IPR044607 GO:0003700
Aip03g00007 137 ProSiteProfiles RWP-RK domain profile. 19 104 IPR003035 -
Aip03g00007 137 PANTHER PROTEIN RKD1-RELATED 10 136 - -
Aip03g00007 137 Pfam RWP-RK domain 37 84 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00007 Aip-Chr3 97410 97823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00007 35 132 AtRKD Transcription Factor Family AT1G18790 47.959 2.03e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aip03g00007 RWP-RK 4.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00007 - - adu:110274768 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00007 03 97410 97823 Aip03g00007 03 97410 97823 ECH