Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03392 ATGAATAGGGTTGTTGTTGAGAGGAATTATGAAAGAAAATGGGATATGGGTATAGCATATCTACATGCATACAAGGCAAACAAATCGGCTCTTGTTCACCAAAACATCTCTGCGGAGAAAGTACTCGTCAATCAGCGATACAACCCGCCGCTTTCAGATTCCGGCCTGTACAAGCTTCTCACTAATGATATTATTTTCTCTGCATTAAAGGCCAGTGCTGCCAAGGGTTATTTGGCTCCCGAGTACACAACTACAGGCAAATTCACAGAGAAAAGTGATGTGTATGCTTTCGGAGTGCTTCTTTTCCAGATCCTCACAGGGAAGCAGAAGATGACTAGCTCGATACGCCTTGCCGTGGAATCCTTCAAGTTCGAAGAATTCATTGACCCGAATCTGCATGGCAGATTCTTTGAATACGAGGCTGCTAAACTCGCAAAGATGGCATTGCTTTGCTCCCACGAGTCTCCCTTCGAGAGGCCAACAATGGAAGCCATTGTTCAAGAACTCAGCAACTGTAGTAGCTGTCTCTGA 531 0.4501 MNRVVVERNYERKWDMGIAYLHAYKANKSALVHQNISAEKVLVNQRYNPPLSDSGLYKLLTNDIIFSALKASAAKGYLAPEYTTTGKFTEKSDVYAFGVLLFQILTGKQKMTSSIRLAVESFKFEEFIDPNLHGRFFEYEAAKLAKMALLCSHESPFERPTMEAIVQELSNCSSCL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03392 176 SUPERFAMILY Protein kinase-like (PK-like) 16 169 IPR011009 -
Aip02g03392 176 Pfam Protein tyrosine and serine/threonine kinase 17 169 IPR001245 GO:0004672|GO:0006468
Aip02g03392 176 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 174 - -
Aip02g03392 176 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 17 174 - -
Aip02g03392 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03392 176 Gene3D Transferase(Phosphotransferase) domain 1 15 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03392 Aip-Chr2 110532501 110533378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03392 17 169 Receptor kinase-like Gene Family AT1G29740 35.758 1.70e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip02g03392 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03392 - - gmx:100806056 291.967