Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03390 ATGGAGGAACGGAACAAGAGAATCTCTGATGATTTAGAAGAGAGAATTGCAAAGGAAGAATCAGATAAGTTGGTAAGAAGAGAAGAAAAGGAAAGGATACTCGAACTGGTACAGCAGCTGGAAATTGAGAAGAAGTTTAAGATGGATGCTATGTCTATGTCTGAAGATCAGAAGAGAATCATATGTGAACTGAAGGAGAAAGTAAAAGATCAAGAATTTCAAATAGTTGAAGGAGAGAAGGAGAGGAAAATACTGCACAACACCATTCTGGAGCTAAAAGGCAATATTCGTGTCTTCTGCCAGGTGAGACCTTTGCTACCAAATGATGGCACAGGAACTGATATGGTGGTTTCTTACCCTCTGTCAACAGCGGCACTTGGCCGCGGAATTGAATTGGTTCAAAATGGGCAGAAGCACTCTTTTACATTTGACAAGGTGTTTAATCACGATGCTTCTCAGAATGACGTATTCCTAGAGATATCCGAGCTGGTGCAGAGTGCACTTGATGGATACAAGGTGTGTATCTTTGCATATGGCCAAACAGGGGCTGGCAAAACTTACACTATGATGGGCAGGCCTGATGCTCCAGATTTGAAAGGGCTCATACCACGTTTGCTAGAACAGATATTCCAGACTAGTCAATCTCTGAAAGATCAGGGTTGGAAGTACAAAATGCAGGTTTGCGTGAACGAGATTTCCTCACTCCTAAAACAGGCTGCGCAATGCAGGACTGTCGGAAGGACACAGATGAAAGACCTATCATCGAGAAGTCATTCTATCTTCACTCTACGTATTTGTGGGATAAACGAGTTTATCAATAAAAGTCTCTCATCTTTGAGAGATGTAATATTGGCTTTGGAAAAGAAAGAGGCGCATGTTCCTTTCAGGAATTCAACACTTACACACCTTCTTCAACCATGCCTGAGAGGTGATTCAAAAACATTGATGTTTGTCAACATTGCACCTGATCGATCATCAGCCAGCGAGTCGCTTTGCTCGTTTCGTTTTGCGGACAGAGTCCATGGCTGTGAAGGGATTCGAAAGCATCCAAAGACTGCTGCCACCCCAACTCCAAAGACTGCTGCCACCCCAGCTCCAAAGCATCAACTTGAGACGGCCACACGCCGCCAACACGGTCCTCAGACTACCAAGAACAATTGA 1161 0.4393 MEERNKRISDDLEERIAKEESDKLVRREEKERILELVQQLEIEKKFKMDAMSMSEDQKRIICELKEKVKDQEFQIVEGEKERKILHNTILELKGNIRVFCQVRPLLPNDGTGTDMVVSYPLSTAALGRGIELVQNGQKHSFTFDKVFNHDASQNDVFLEISELVQSALDGYKVCIFAYGQTGAGKTYTMMGRPDAPDLKGLIPRLLEQIFQTSQSLKDQGWKYKMQVCVNEISSLLKQAAQCRTVGRTQMKDLSSRSHSIFTLRICGINEFINKSLSSLRDVILALEKKEAHVPFRNSTLTHLLQPCLRGDSKTLMFVNIAPDRSSASESLCSFRFADRVHGCEGIRKHPKTAATPTPKTAATPAPKHQLETATRRQHGPQTTKNN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03390 386 Pfam Kinesin motor domain 271 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03390 386 Pfam Microtubule binding 77 232 IPR031852 GO:0008017
Aip02g03390 386 Gene3D Kinesin motor domain 231 270 IPR036961 -
Aip02g03390 386 MobiDBLite consensus disorder prediction 347 386 - -
Aip02g03390 386 ProSiteProfiles Kinesin motor domain profile. 95 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03390 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 342 IPR027417 -
Aip02g03390 386 Gene3D Kinesin motor domain 38 230 IPR036961 -
Aip02g03390 386 Gene3D - 273 384 - -
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN 44 229 - -
Aip02g03390 386 SMART kinesin_4 93 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN 272 346 - -
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN 229 270 - -
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 229 - -
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN KLP-3 272 346 - -
Aip02g03390 386 PANTHER KINESIN-LIKE PROTEIN KLP-3 229 270 - -
Aip02g03390 386 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03390 386 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03390 386 PRINTS Kinesin heavy chain signature 248 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03390 Aip-Chr2 110526486 110528901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03390 72 340 Calmodulin-binding Proteins AT5G65930 31.755 2.28e-42 156