Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03389 atgTCTGCCCCTCCGGACGTCGCTGCTTTTGATTCGTGTCCTGTCACTCGGATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCACTGCCTCTAAATCCAAGGACAGAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTGTGAGTATCACCACGATCTGGGTATGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCATCCACAGAATCCTGAAGACATTGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAATGATGTAGAATATTGGGGAATAGACTTGAAGATGGTGTCACGAACTCGATGTTTGACATATGAGGAAGCCGGTAAATGTGGTTCCAATTTTAAGGGTTGGAAGCCTCAAACTGTCGAAATCTATTCCCAACACTTAGAACATCATGTTACTTTCAATTTCAACACTTTCATTCCCAATGACAATTGGTATGGTTATAATTTCTGCCAAACGCCGCCTCCGTCTCCTCCGCCACATCCTGTTCCTCCTCATGACGATTCTCCTCCTCCACCATCACCGTCGCTGCCACCACATCCTCCTCATCATGATGAGCCTCCTCCTCCACCACCACCATCACCATCACCTCCTCCCCCATCTCCTCCCCCTCCACCACCATCACTGCCTTCTCCTCTTCCACTGTCTTCTTAA 741 0.4615 MSAPPDVAAFDSCPVTRICCKKLSESGIDEKKHKPSTSNTTASKSKDRMEDYNFAMKRMMRNPCEYHHDLGMNYTLITDNLIVGSHPQNPEDIDHLKKEEGVTYILNLQQDNDVEYWGIDLKMVSRTRCLTYEEAGKCGSNFKGWKPQTVEIYSQHLEHHVTFNFNTFIPNDNWYGYNFCQTPPPSPPPHPVPPHDDSPPPPSPSLPPHPPHHDEPPPPPPPSPSPPPPSPPPPPPSLPSPLPLSS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03389 246 Pfam Embryo-specific protein 3, (ATS3) 143 180 IPR010417 -
Aip02g03389 246 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 19 129 - -
Aip02g03389 246 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 118 IPR029021 -
Aip02g03389 246 MobiDBLite consensus disorder prediction 185 246 - -
Aip02g03389 246 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 19 129 - -
Aip02g03389 246 Gene3D Protein tyrosine phosphatase superfamily 56 170 IPR029021 -
Aip02g03389 246 PRINTS Proline rich extensin signature 182 194 - -
Aip02g03389 246 PRINTS Proline rich extensin signature 199 220 - -
Aip02g03389 246 PRINTS Proline rich extensin signature 220 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03389 Aip-Chr2 110522144 110526095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03389 38 129 Protein tyrosine phosphatase (PTP) family AT3G10940 70.652 1.73e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03389 - - aip:110271941 232.261