Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03379 ATGGCTTCTGCTGCATTTATTGAACCTCTTCCGGTAGTGGAGTATGCTGCCCAGCTGCTAGGAAAAGATTTACTGTCAAGGCAATTGTCTGATGCTGTTCGCATTAAGGCTTGCAAAATTGTTGAGAAGCAACATTATACAAAAAGGTTGAACGAAAAGCAAATCACTGCTCTTCTTAAAGTTACTTGCCAAAGACCTCGCGATCTGGAAAATGACATTTTGCGGAGTCAGCATCTCAAGGAGTGA 246 0.4228 MASAAFIEPLPVVEYAAQLLGKDLLSRQLSDAVRIKACKIVEKQHYTKRLNEKQITALLKVTCQRPRDLENDILRSQHLKE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03379 81 PANTHER PROTEIN ARGONAUTE 10 35 78 - -
Aip02g03379 81 PANTHER PROTEIN ARGONAUTE 10 1 36 - -
Aip02g03379 81 SUPERFAMILY PAZ domain 37 75 IPR036085 GO:0005515
Aip02g03379 81 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 35 78 - -
Aip02g03379 81 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03379 Aip-Chr2 110391574 110392615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03379 12 78 Eukaryotic Initiation Factors Gene Family AT5G43810 55.128 1.98e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03379 K11593 - egr:104456350 78.5666