Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03361 ATGGAAACTGAAGCTCCTGAAGACAGAGAGGATAACAGCGCTGATGACGACACAATCGAAAAGGGTCCAGAATCATCTGAAATAACTGAGGAACTCTCAAGTAGACGACATGGGACTAGGAAAAGCCTCATCTTGGAGATTCCAACAACAAGCACTGTGGATGAAGATTTTGTGAGGATAAACATGCCTCTAACTCCTCCTCCAAGAAAAGTGGCCTTTTCACCATGTCCAAGCCCTGCTTTCTCCAGAGTCAATGAGTCACCAGGCCCTACAGCATCAAGGAATAGATCAACTATGAAAACTTTATTTCCCAAACTCAGTTTAAAGATCAGGAGCACAAGCTCACAGCAGATCGAAAATGCTGCTTTTCTTGCACTGGAAGGTTCACCAAAGGTGGCACCAAAGAAGCCTCTTCTTCCGAGGACATTTTCACTTACAAAGTTGATCACCCCTAGAGGGAAGAACACAGCATCCTTGCCTGTAACACCCATTGCTCACTCTAATCCAGGGTCCACACATGGAGGAAATGCTGCTTATCTAGCTTCAATTGATAAAGGGATCCAATTACCAATGCATCGTTCTCGTTCAGTTCCAATACTTAACAAGGCAGGGAGCACAAGTGTAGGTGGAATGTTTCGTATAATTCCAACCACACCAACATCAGCGGCATCTCCATCTGGTGATAGTGTTGAGAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGGGAAGGTGCTGATGATACTCTTAAATTGGAGTGTAGTTGCAAAGGTGAACTTTCACTGGCTCACCAACAATGTGCAGTTAAATGGTTTAGCATTAAAGGAAACAGAACATGTGATGTTTGCAAGCAAGAAGTTAAGAACTTACCTGTGACTCTCTTGCGGCTTCAAACTGCACCTAGAGGGCAACATGCTGAGATTTCTCAAACAAGGCAAGGAATTTTCAGGGTTTGGCAGGATGCTCCCATTCTTGTAGTTGTCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTATGGGCTCTGGTGCTGTTGCCATGTCTCTTCCATTTTCTTGTATACTTGGTCTTCTTGCTAGCATGACATCTACAACAATGGTGAGGAGAAATCATGTTTGGGTTTATGCAACTGTGCAGTTTGTTCTGGTGGTTGTCAGTGGACACCTTTTCTATTCATTGGTTCATATGCAAGCTGTTCTAGCTATTTTGCTTGCCACATTTACTGGCTTTGGGGCTGTGATGTTTGTAGCTTCTGTTCTTGCTGAGATATCAAATTGGAGGAGAACAAGTCTTGCTCAGTTGAATCAAGAGGAGGCAGTGGCACCTGATGAATCATCTTCAGCAGGTCATCATCAATCTGAGGCTCCTGAAAGTAATTTGAGAGATTCCCCTCCTATGCATGTGAACCAGCTAAATGTGCTCCCACTCGGCTCTCTCTCTCTCTCTCTCTCGCCTGCTTGCCGTCACCGTTGGCTCCTATGCCTCGTCCCCGCACCGCTTGTCTTAGTTTGCCTCTACTTCCTCCATGCGTCTTCTTCCTCTGCTCATGATTCCTCCTCGTTCCTCCGTCACCGTCTTCTTGCTTCTGCTTCTGCAGTGTGGGTAGTCCTTCAACAAGTGGATAATTTCACTGGTTAA 1686 0.449 METEAPEDREDNSADDDTIEKGPESSEITEELSSRRHGTRKSLILEIPTTSTVDEDFVRINMPLTPPPRKVAFSPCPSPAFSRVNESPGPTASRNRSTMKTLFPKLSLKIRSTSSQQIENAAFLALEGSPKVAPKKPLLPRTFSLTKLITPRGKNTASLPVTPIAHSNPGSTHGGNAAYLASIDKGIQLPMHRSRSVPILNKAGSTSVGGMFRIIPTTPTSAASPSGDSVENEDGGEDIPEEEAVCRICMVELGEGADDTLKLECSCKGELSLAHQQCAVKWFSIKGNRTCDVCKQEVKNLPVTLLRLQTAPRGQHAEISQTRQGIFRVWQDAPILVVVNMLAYFCFLEQLLVSSMGSGAVAMSLPFSCILGLLASMTSTTMVRRNHVWVYATVQFVLVVVSGHLFYSLVHMQAVLAILLATFTGFGAVMFVASVLAEISNWRRTSLAQLNQEEAVAPDESSSAGHHQSEAPESNLRDSPPMHVNQLNVLPLGSLSLSLSPACRHRWLLCLVPAPLVLVCLYFLHASSSSAHDSSSFLRHRLLASASAVWVVLQQVDNFTG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03361 561 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 303 IPR013083 -
Aip02g03361 561 MobiDBLite consensus disorder prediction 217 238 - -
Aip02g03361 561 MobiDBLite consensus disorder prediction 1 41 - -
Aip02g03361 561 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 9 467 - -
Aip02g03361 561 CDD RING_CH-C4HC3_MARCH 246 295 - -
Aip02g03361 561 SMART ringv_2 245 295 IPR011016 GO:0008270
Aip02g03361 561 Pfam RING-variant domain 246 294 IPR011016 GO:0008270
Aip02g03361 561 SUPERFAMILY RING/U-box 242 298 - -
Aip02g03361 561 MobiDBLite consensus disorder prediction 15 41 - -
Aip02g03361 561 MobiDBLite consensus disorder prediction 457 479 - -
Aip02g03361 561 PANTHER OS02G0165000 PROTEIN 9 467 - -
Aip02g03361 561 ProSiteProfiles Zinc finger RING-CH-type profile. 238 301 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03361 Aip-Chr2 110286635 110290723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03361 243 301 C3H Transcription Factor Family AT2G37950 42.373 1.57e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03361 - - gmx:100787963 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03361 02 110286635 110290723 Aip02g03361 02 110286635 110290723 ECH