Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03359 ATGGGTAACATAGGAAGTAGTAGTGCCAGCAACCGCAGAAGACACGGTGGTGGCGGTGGCGGAAGTGGACGGAGGATCCATCCTCCACCTCCTCCTCCGCCGCCGGTGACGCCACAGCCGGAAATCACAGCCAATCGGTTCGTGTACCCTGCTGCTGCGACTCCATATCATAACTATCCCGGTTATTATCCGCCGCCGGTGCCTTTGCCGGCACCTTATGACCACCACCACCGGCCCGCGGCGGTGGAGCCGATGTGGGGGCGGTATCCTCCGCCGGCAGCGCCTATGCCTCCGACGCCGTATGTGGAGCACCAGAAGGCGGTTACTATAAAAAATGATGTGAACATCAAGAAGGAAACTTTGAGGATTGAAGCTGATGAAGAGAACCCTGGGAAGTTCCTTGTTTCATTCACATTTGACGCCACCGTTTCTGGGAGCATTACCATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATTCTTACTCCAATGAAGGAAGATTCTCTTCCACCTGTGACTGTACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACCGGTATTGATTTTTTGCAATTTGAGGAATCCGAGTTATTGAAAGTGGGAGAGATGGATATCTATCCTCTAGTAGTTAAGGCAGATGCAATGTTGGGTGATCATGATGGATCAAATGAGACTCCAAATGACGGATCAAATGAGACTCCAAAGCATGGATCAAATGAAACTCCAAATGAAGGATCTAATGAAACTCCAAATGAAGGACCTAATGAAACTCCAGTAACAGGTATTACAAACTCGCAGATAACAAAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTCAAGCAGATCTTGTGGGTGAATGGATTGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAGTGGAGAGTGAAGTGGATGGAAATGACCCAGGAAAAGAATGTGTTATTTGTCTGTCAGAGCCCAGGGATACAACTGTCCTTCCTTGCCGTCACATGGTATTCACTGTCTCCCCTTTTTGGATTAATTTTTCTCTTGATCATTTGATTACTAGAATGATGCCAGTGGTAGTTATGGATATCATTCCATGA 1122 0.475 MGNIGSSSASNRRRHGGGGGGSGRRIHPPPPPPPPVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRPAAVEPMWGRYPPPAAPMPPTPYVEHQKAVTIKNDVNIKKETLRIEADEENPGKFLVSFTFDATVSGSITILFFAKEGEGCILTPMKEDSLPPVTVHFQQGLGQKFRQPAGTGIDFLQFEESELLKVGEMDIYPLVVKADAMLGDHDGSNETPNDGSNETPKHGSNETPNEGSNETPNEGPNETPVTGITNSQITKAVFEKEKGEFQVKVVKQILWVNGLRYELQEIYGIGNSVESEVDGNDPGKECVICLSEPRDTTVLPCRHMVFTVSPFWINFSLDHLITRMMPVVVMDIIP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03359 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 348 IPR013083 -
Aip02g03359 373 MobiDBLite consensus disorder prediction 228 267 - -
Aip02g03359 373 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 237 - -
Aip02g03359 373 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 252 345 - -
Aip02g03359 373 MobiDBLite consensus disorder prediction 222 267 - -
Aip02g03359 373 PANTHER MAHOGUNIN 252 345 IPR045194 GO:0061630
Aip02g03359 373 PANTHER MAHOGUNIN 1 237 IPR045194 GO:0061630
Aip02g03359 373 MobiDBLite consensus disorder prediction 25 40 - -
Aip02g03359 373 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03359 Aip-Chr2 110275626 110278759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03359 87 344 C3H Transcription Factor Family AT3G09770 59.091 4.32e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03359 - - aip:107626498 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03359 02 110275626 110278759 Aip02g03359 02 110275626 110278759 ECH
Aip06g01701 06 35565055 35568688 Aip02g03359 02 110275626 110278759 PCT