Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03358 ATGCGAGGAGAGAGTGAATTCGTGGCGGAATTGGCTTCCCTTGCAAATATCAGGCACCAAAATCTTGTTAGACTGAGAGGGTGTTGCGTGGAAGGAGCTCATAGATATTTGGTGTATGAATACATGGACAACAATAGTCTTTACCACACCTGTTTGCGTTCGGAGGAAGGGAGGATGAGATTCAAGTGGGAAGCAAGGAAGGAAGTTTCCACAGGTGTGGCTCACGGCCTTACCTATCTCCATCAACACCTTAGGCCTCACGTTGTTCATAGAGACATCAAAGCCAGTAACATACTCCTTGATACTCATTTTATGCCTAAGATTTCTGACTTTGGCTTAGCTAAACTTTTAAGAGACGAAACGTCTTATATTAGTACTAAAGTAGCAGGGACATTGGGTTATCTTGCACCAGAATATGCTAGTTCTGGACGATTCACAAGAAAATCAGATGTTTATAGTTTTGGAGTTTTGCTTTTACAAATTGTTACTGGTCTACCAGTTGTGGATGCCTATCAAGATACTGATCGTTTCATCGTACAGAAGGCATGGAAAGCATATGAAGAGAACAACCTAATAAGGATGGTGGATCCTATGCTTAATGTGAACTTTTCGGTGGAAGAGGTGATTAGATTCTTGAAGGTGGGTTTGCTTTGCGTGCAAGAAACAGCAAAGCTGAGGCCAAGAATGTTAGAGGTTGTGGAGATGTTGACCAACAACAATACTGACATGAATGACATTCGCATTTCCAAACCTGGCTTTGTTGCTGATCTTAGGAACATTAGAATCAAGAAACAAGAAGGAGCAATGCACTCATCAAAGGAATCAACAAGTTACAGTGGAGCAACCTTTGCTGCAAGTCCAAGCTCCATTTTGACTACTATGATGAATGTTGGTCGTTAG 900 0.4178 MRGESEFVAELASLANIRHQNLVRLRGCCVEGAHRYLVYEYMDNNSLYHTCLRSEEGRMRFKWEARKEVSTGVAHGLTYLHQHLRPHVVHRDIKASNILLDTHFMPKISDFGLAKLLRDETSYISTKVAGTLGYLAPEYASSGRFTRKSDVYSFGVLLLQIVTGLPVVDAYQDTDRFIVQKAWKAYEENNLIRMVDPMLNVNFSVEEVIRFLKVGLLCVQETAKLRPRMLEVVEMLTNNNTDMNDIRISKPGFVADLRNIRIKKQEGAMHSSKESTSYSGATFAASPSSILTTMMNVGR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03358 299 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03358 299 SUPERFAMILY Protein kinase-like (PK-like) 4 237 IPR011009 -
Aip02g03358 299 SMART serkin_6 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03358 299 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 273 - -
Aip02g03358 299 Pfam Protein kinase domain 5 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03358 299 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 5 273 - -
Aip02g03358 299 Gene3D Transferase(Phosphotransferase) domain 1 43 250 - -
Aip02g03358 299 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Aip02g03358 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03358 Aip-Chr2 110263362 110265330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03358 2 287 Receptor kinase-like Gene Family AT1G56120 42.160 6.50e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g03358 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03358 - - gmx:100813945 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03358 02 110263362 110265330 Aip02g03358 02 110263362 110265330 ECH
Aip06g01703 06 35660630 35663381 Aip02g03358 02 110263362 110265330 PCT