Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g03358 | ATGCGAGGAGAGAGTGAATTCGTGGCGGAATTGGCTTCCCTTGCAAATATCAGGCACCAAAATCTTGTTAGACTGAGAGGGTGTTGCGTGGAAGGAGCTCATAGATATTTGGTGTATGAATACATGGACAACAATAGTCTTTACCACACCTGTTTGCGTTCGGAGGAAGGGAGGATGAGATTCAAGTGGGAAGCAAGGAAGGAAGTTTCCACAGGTGTGGCTCACGGCCTTACCTATCTCCATCAACACCTTAGGCCTCACGTTGTTCATAGAGACATCAAAGCCAGTAACATACTCCTTGATACTCATTTTATGCCTAAGATTTCTGACTTTGGCTTAGCTAAACTTTTAAGAGACGAAACGTCTTATATTAGTACTAAAGTAGCAGGGACATTGGGTTATCTTGCACCAGAATATGCTAGTTCTGGACGATTCACAAGAAAATCAGATGTTTATAGTTTTGGAGTTTTGCTTTTACAAATTGTTACTGGTCTACCAGTTGTGGATGCCTATCAAGATACTGATCGTTTCATCGTACAGAAGGCATGGAAAGCATATGAAGAGAACAACCTAATAAGGATGGTGGATCCTATGCTTAATGTGAACTTTTCGGTGGAAGAGGTGATTAGATTCTTGAAGGTGGGTTTGCTTTGCGTGCAAGAAACAGCAAAGCTGAGGCCAAGAATGTTAGAGGTTGTGGAGATGTTGACCAACAACAATACTGACATGAATGACATTCGCATTTCCAAACCTGGCTTTGTTGCTGATCTTAGGAACATTAGAATCAAGAAACAAGAAGGAGCAATGCACTCATCAAAGGAATCAACAAGTTACAGTGGAGCAACCTTTGCTGCAAGTCCAAGCTCCATTTTGACTACTATGATGAATGTTGGTCGTTAG | 900 | 0.4178 | MRGESEFVAELASLANIRHQNLVRLRGCCVEGAHRYLVYEYMDNNSLYHTCLRSEEGRMRFKWEARKEVSTGVAHGLTYLHQHLRPHVVHRDIKASNILLDTHFMPKISDFGLAKLLRDETSYISTKVAGTLGYLAPEYASSGRFTRKSDVYSFGVLLLQIVTGLPVVDAYQDTDRFIVQKAWKAYEENNLIRMVDPMLNVNFSVEEVIRFLKVGLLCVQETAKLRPRMLEVVEMLTNNNTDMNDIRISKPGFVADLRNIRIKKQEGAMHSSKESTSYSGATFAASPSSILTTMMNVGR | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g03358 | 299 | ProSiteProfiles | Protein kinase domain profile. | 1 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g03358 | 299 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 237 | IPR011009 | - | |
Aip02g03358 | 299 | SMART | serkin_6 | 1 | 212 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g03358 | 299 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 5 | 273 | - | - | |
Aip02g03358 | 299 | Pfam | Protein kinase domain | 5 | 213 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g03358 | 299 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 | 5 | 273 | - | - | |
Aip02g03358 | 299 | Gene3D | Transferase(Phosphotransferase) domain 1 | 43 | 250 | - | - | |
Aip02g03358 | 299 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 42 | - | - | |
Aip02g03358 | 299 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 88 | 100 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g03358 | Aip-Chr2 | 110263362 | 110265330 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g03358 | 2 | 287 | Receptor kinase-like Gene Family | AT1G56120 | 42.160 | 6.50e-73 | 238 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aip02g03358 | Pkinase | 1.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g03358 | - | - | gmx:100813945 | 429.483 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip02g03358 | 02 | 110263362 | 110265330 | Aip02g03358 | 02 | 110263362 | 110265330 | ECH | |
Aip06g01703 | 06 | 35660630 | 35663381 | Aip02g03358 | 02 | 110263362 | 110265330 | PCT |