Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03357 ATGCTCCAAGTTTCAATCTTTCTCCATTTTTTGTTCTTATTCTTCATTTCTGCAACTGCCTTTGGAACCATGGGACCAATCTCTGCATCCTTCGGGAAAGACGAGCTCTTCTGCGCCATCGACGCTAGCGGCAATCAAAACATTCTATGCTTCGGAAACAACGTAACTTCACAAGCTCCATCACAATCCAATTCATCATCATCGTCTTCTTCTTCTTCACTACCTTATTTCACCAGCGTTCCTGCCATGTCAGGGCTTTCCGGGGGCGAAGGTTTTTTCTGCGGCATTTTAGCGAATACCTCACAGGCTTTTTGCTGGGGCGCCGGAAAACCTGCAGGTGATCCCGTTCTGGTGCCGCCAGCGTACCGGAACACCGCGTACTCCCGCATTGCCGCCGGAAAGTCCCACGTCTGCGCCGTCAGAGGATCCTACTTCGCCGATCGAGCTTCCGGCAGCGTGGATTGCTGGGAAGTCGCTCAGACGCGGAACAACACGTTCTACGCCAAGCAGAGCCTTGCGTTCTACGACCAATCCGTTAGCAACCTGGAGCTGAACGACGTGGTTTCCGGCGAGGATTTCGCTTGCGGGAGCGTTAGAGACGGAGGCCTCGTCTGCTGGGGTCCAAATTCGAAGAGTCTCCAAGTTTCCAACGTTTCCGATAGCTTCTCTGTTTTGGCTTCAGGAAGAAACGCGATTTGCGGAGTTTCAAACTCTTCTGGCGAGTTGAAATGCTGGGGCGAGGCGAGTTCATATTGGGATCTTGAATCAGCGGGACGGGTTCAGGTAGTTTCTCTGTCTGCAGGTTCGAAGCATTTCTGTGGGATCAGAAAAGACAGTCATGTTGTGGAGTGTTGGGGTGCCTCAGATTCGTCCGTGGTTCCAAAAGGTTATGGCTTTTTGGCCATTGCTTCTTCGGATTACACAACTTGTGGGATCAGAGAAGATGATCTTTTGCTTGATTGTTGGGTGGTGAACGCATCAAAACCCAATTTTGACTCTCCCTTGGAGCTCTCAAGCCCTGGGCTTTGTCAAAAGGGGTCTTGCGGTGTTGGGGAGTTTGCTTTCAATGTGAGCGTTCTCAATGAGCCTGATTTGAGCAGCTTGTGTGTGAGGCAGGATTTGAGGATATGTTCACCTTGTGGCTCTAATTGCTCTCGGGGTTTCTTCTTGTCTAGTCCTTGTGGTTTGAGCAATGACAGGGTGTGCACTCCTTGTTCTCTTTGCCAGAATAGCTCTTGCTGGGGTGTTTGTGGGATCCACCCAACTTCAGGGTTGCACTTGCACCATTTGCTTCGCTGGGTCCTCATAATTGGATCTTCTGCCTTGGGAGTCCTGCTGATTTTGGTTTGTGGCTTGGTGGCGCGAGGGCGGAGGAGGAAGGGGACAAAGAAGCAATCCAACAAGTCTTGCATGGGGAAGATGGAGCAGGAGGATGATGGCGATTTGAATGGCCTTAACTCGACTCCTTCAATTGCTTCGTGTCCAGGGGTGCCTCAGGTTTTCCGGCTTTCGGAGCTGAAAGATGCTACAAATGGATTCAAAGAGTTCAATGAGCTTGGAAGGGGGAGTTATGGGTTTGTTTACAAGGCTGCTTTGGCAGACGGCAGAGTGGTTGCTGTGAAGAGGGCTAATGCAGCCACAATCATACACACCAACAACCGCGATTTCGAGATGGAGCTTGAAATCTTGTGTAAGATTAGACATTGTAATATCGTTAACCTGGTTGGTTATTGCGCGGAGATGGGGGAAAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACACTTTATGATCATCTCCACGGTGGCCTTTCTCCTCTTAATTGGACCCTCAGGTTGAAGATTGCTATGCAGGCTGCCAAGGGCCTCGAGTACCTTCACAGGGAGCTTTCACCTCCCATCCCCCACAGGGATCTCAACACCTCAAACATTCTCTTGGATTCAGACTGGGGGGCTCGCATTTCGGATTTCGGACTCATCACTTCCACTGACAAGGACCTTCGTGGGGACTTGGAAACTGATGTTTATAATTTTGGAATTGTGTTGCTTGAGATTCTAAGTGGCAGGAAAGCTTGTGACCCAGATTTCAATCCTCCGGACATAATAGAGTGGGCAGTGCCTTTGATCAAACAGGGCAAGGCGGCTGCTATACTCGATCGCTGCACGCCTCTGCCCAGAAACGTTGAGCCTTTGCTTAGGCTTGCAGATATAGCTGAGCTTTCTGTCAGACACAATCCGGCAGACCGTCCGCCTCTGCCGGATATAGCATCTTGGTTGGAGCAAATCGTCAAGGACGGATTAATTTTATAG 2310 0.5013 MLQVSIFLHFLFLFFISATAFGTMGPISASFGKDELFCAIDASGNQNILCFGNNVTSQAPSQSNSSSSSSSSSLPYFTSVPAMSGLSGGEGFFCGILANTSQAFCWGAGKPAGDPVLVPPAYRNTAYSRIAAGKSHVCAVRGSYFADRASGSVDCWEVAQTRNNTFYAKQSLAFYDQSVSNLELNDVVSGEDFACGSVRDGGLVCWGPNSKSLQVSNVSDSFSVLASGRNAICGVSNSSGELKCWGEASSYWDLESAGRVQVVSLSAGSKHFCGIRKDSHVVECWGASDSSVVPKGYGFLAIASSDYTTCGIREDDLLLDCWVVNASKPNFDSPLELSSPGLCQKGSCGVGEFAFNVSVLNEPDLSSLCVRQDLRICSPCGSNCSRGFFLSSPCGLSNDRVCTPCSLCQNSSCWGVCGIHPTSGLHLHHLLRWVLIIGSSALGVLLILVCGLVARGRRRKGTKKQSNKSCMGKMEQEDDGDLNGLNSTPSIASCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLVGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWTLRLKIAMQAAKGLEYLHRELSPPIPHRDLNTSNILLDSDWGARISDFGLITSTDKDLRGDLETDVYNFGIVLLEILSGRKACDPDFNPPDIIEWAVPLIKQGKAAAILDRCTPLPRNVEPLLRLADIAELSVRHNPADRPPLPDIASWLEQIVKDGLIL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03357 769 PANTHER OS01G0750732 PROTEIN 24 767 - -
Aip02g03357 769 Gene3D - 176 340 IPR009091 -
Aip02g03357 769 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 24 767 - -
Aip02g03357 769 SUPERFAMILY Protein kinase-like (PK-like) 487 760 IPR011009 -
Aip02g03357 769 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Aip02g03357 769 Gene3D Transferase(Phosphotransferase) domain 1 591 766 - -
Aip02g03357 769 Pfam Protein tyrosine and serine/threonine kinase 517 665 IPR001245 GO:0004672|GO:0006468
Aip02g03357 769 Gene3D - 22 171 IPR009091 -
Aip02g03357 769 Gene3D Phosphorylase Kinase; domain 1 486 590 - -
Aip02g03357 769 ProSiteProfiles Protein kinase domain profile. 513 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03357 769 SUPERFAMILY RCC1/BLIP-II 45 316 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03357 Aip-Chr2 110259717 110262600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03357 6 761 Receptor kinase-like Gene Family AT3G59420 31.197 1.72e-109 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip02g03357 PK_Tyr_Ser-Thr 7.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03357 - - aip:107626497 1536.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03357 02 110259717 110262600 Aip02g03357 02 110259717 110262600 ECH