Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03356 ATGGCATCAAACAGGGGTCAAGGTGGAATTCAACAATTGTTGGCTGCTGAACAAGAAGCACAAAGGATTGTAAATGCTGCTAAAAATGAAAAATTGGCAAGGTTGAAACAAGCCAAAGAAGAGGCAGACAAGGAGGTTGCAGAATACAGAGCTCAACTGGAACGTGAGTTTCAACAAAAAGTATCAGATAGCACTGGAGATTCTGGTGCTAATGTGAAGAGGCTTGAACATGAAACTGAAGGGAAAATCCATCACCTGAAAACAGAGGCCGCAAGAATTTCTGATGATGTTGTAGCCATGCTTCTCAAGTATGTAACAACCGTGCAAAATTAG 333 0.4144 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEADKEVAEYRAQLEREFQQKVSDSTGDSGANVKRLEHETEGKIHHLKTEAARISDDVVAMLLKYVTTVQN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03356 110 Coils Coil 10 59 - -
Aip02g03356 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip02g03356 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip02g03356 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip02g03356 110 MobiDBLite consensus disorder prediction 57 77 - -
Aip02g03356 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Aip02g03356 110 Gene3D - 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03356 Aip-Chr2 110251890 110254181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03356 1 110 Primary Pumps ATPases(2) AT3G01390 71.818 5.78e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03356 K02152 - gmx:100306550 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03356 02 110251890 110254181 Aip02g03356 02 110251890 110254181 ECH
Aip06g01704 06 35711288 35715049 Aip02g03356 02 110251890 110254181 PCT