Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03351 ATGGTTCAACACAGGCAAAAGTGGAAGAAAGACGAAGAAGAAGCTCTTAAAGCCGGAGTAATGAAGTATGGTTCCgggaactggaagaaaatcctccaggatcccaaattttcgcgatttctcacctcacgatccaatgttaacctcaagGATAAGTGGCGGGTCCTTACCGCTCAAAGGTCCAAGCAACCCACACATGTAGCGGCAAGCTCCAAGGCACGGAGAAAACTTGAAACAGAGAAAGCCGCCGCTCTTAAATCTGAACTAAAATGCCTTCGTGAGGAGTTAAAACAAATCAGAGATGACCGTGCTTGTCAACAGAAGCAAGTAAAGGATTTAACAGCAGAATTAGCAAAGTACAAAGAAGAAACAAATGCCCTTGAGGACACTATACTTCAACTGCAGCTGAAGTTACGTGAAAGAGAGGAGCTGAGAAAAAAGATGCAGAACACCATTCTGGACCTAAAAGGAAAGATTCGAGTGTTCTGTCGGGTGAGACCTTTGCTACCAGATGATGGCACAGGAACTGATATGGTGTTTAATCACGACGCTTCTCAGAATGACGTATTCCTAGAGATATCCGAGCTGGTGCAGAGTGCACTTGATGGATACAAGGTGTGTATCTTTGCATATGGCCAAACAGGGGCTGGCAAAACTTACACTATGATGGGCAGGCCTGATGCTCCAGATTTGAAAGGGCTCATACCACGTTCGCTAGAACAAATATTCCAGACTAGTCAATCTCTGAAAGATATGGGTTGGAAGTACAAAATGCAGGTGTCAATCTTGGAAATATATAATAGGGAGATCAGGGATTTATTATTAAATAGGCCATGTGGACCTGGCAAGAAGCGCATTAGACATGATGCAAACGGAAACGCATTCGTTCCTGACCTAACCATTGTGGATGTTTGTAGCATGAACGATATTTCCTCACTCCTAAATCGGGCTGCACAATGCAGGTCTGTGGGAAGGACACAGATGAATGAGGAATCATCGAGAAGCCATTTTGTCTTAACTGTGCATATTTGTGGGACAAATGAGAACACCAAACAACAAGAACAAGGTGTCTTAAGTCTGATTGATCTTGCTGGAACTGCAAGAGTTTCAAGTAGTGGGGTAACCGGGGACCGGTTGAAGGAAAATCAGGCTATCAATGACAGTCTCTCATCTTTGATTGATGTAATATGCGCTTTGGCAAAGAAAGCTAAGCATGTTCCTTTCAGGAATTCAATACTTACAGAGCTTCTTCAGCCCTATCTTGTTGGTGATTCAAAAACATTGATGTTTGTCAACATTGCACCTGATCAATCATCAACCAGCGAGTCGATTGGCTCGCTTCGTTGGGCGGCCAGAGTCAATGACTGTGGAATCGGGATTCCAAAGCCGAAGTGA 1395 0.4158 MVQHRQKWKKDEEEALKAGVMKYGSGNWKKILQDPKFSRFLTSRSNVNLKDKWRVLTAQRSKQPTHVAASSKARRKLETEKAAALKSELKCLREELKQIRDDRACQQKQVKDLTAELAKYKEETNALEDTILQLQLKLREREELRKKMQNTILDLKGKIRVFCRVRPLLPDDGTGTDMVFNHDASQNDVFLEISELVQSALDGYKVCIFAYGQTGAGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDMGWKYKMQVSILEIYNREIRDLLLNRPCGPGKKRIRHDANGNAFVPDLTIVDVCSMNDISSLLNRAAQCRSVGRTQMNEESSRSHFVLTVHICGTNENTKQQEQGVLSLIDLAGTARVSSSGVTGDRLKENQAINDSLSSLIDVICALAKKAKHVPFRNSILTELLQPYLVGDSKTLMFVNIAPDQSSTSESIGSLRWAARVNDCGIGIPKPK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03351 464 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
Aip02g03351 464 Pfam Kinesin motor domain 177 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Aip02g03351 464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 455 IPR027417 -
Aip02g03351 464 SMART kinesin_4 156 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 CDD SANT_TRF 6 57 - -
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN 177 462 - -
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN KLP-3 69 124 - -
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN KLP-3 126 177 - -
Aip02g03351 464 Coils Coil 75 154 - -
Aip02g03351 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN KLP-3 177 462 - -
Aip02g03351 464 PRINTS Kinesin heavy chain signature 326 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 PRINTS Kinesin heavy chain signature 406 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 PRINTS Kinesin heavy chain signature 203 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 PRINTS Kinesin heavy chain signature 357 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 SMART sant 4 59 IPR001005 -
Aip02g03351 464 Pfam Microtubule binding 138 171 IPR031852 GO:0008017
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN 69 124 - -
Aip02g03351 464 PANTHER KINESIN-LIKE PROTEIN 126 177 - -
Aip02g03351 464 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Aip02g03351 464 ProSiteProfiles Kinesin motor domain profile. 158 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip02g03351 464 Gene3D - 2 58 - -
Aip02g03351 464 Gene3D Kinesin motor domain 100 457 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03351 Aip-Chr2 110190888 110193532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03351 85 453 Calmodulin-binding Proteins AT5G65930 38.384 2.27e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g03351 Kinesin 3.4e-92 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03351 K10405 - csin:114297902 457.988