Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03347 ATGCACGAGCTTCATCTTATCTTTAATGCTGCCGCTGCCAGTCTTCCATTCAGAGTCACGAGAAGAAGAGAACTATGGCTTCTGGTGGTAGATCAAGATCTTCTGTTTCATGATGATGTTGAGACAGAGAAGTTAACAGAAAGCAAGGAAAAGAGCCACTTATCAATGCATGGCTATAACAAGATAATGAGCGGAAAAGAGAATGATAGGAAGGATGCAACAAGAGGAAAGTGCTTGGAAAGAAGAAGAGAACTATCTAGAGTGTTCTCAGAGGATTATGATGCAGAAGAGATTCTGATATTGGATCCAAGGGGTCCAAGAGTGAATAGATGGAACAGGATTTTCTTAGTAGCATGCTTGATTTCATTGTTTGTGGATCCTTTGTTCTTTTACTTGCCAGTGGCCAAGAAAGAAATGTGCATTGACATGTCTATTGGTCTTGAAGTTTCCCTCACCATAATCCGGTCCATAGTTGATGCATTTTACATTATTCAGATTTATGTAAGGTTTCAAACTGCTTATGTGGCGCCTTCTTCGCGTGTTTCTGGTAGAGGAGAGCTTATCATAGACTCCTCCAAGATTGCATCACAGTATATGCATAAGGACTTTTGGATTGATCTACTGGCTGCACAGCCTCTTCCACAGGTGGTTATTTGGACCGTAATTCCAAATCTAGAGGGGTCACAAATGTTTGCTTCAAGGCATGTTCTGAGCATGGTTACCATTTTTCAGTACCTCTTGAGGCTATATCTGATTTATCCACTCTCATATGAAATCATCAAGACTAAAGGGGTAATGATGGAGAAAGCTTGGGCTGGTGCAGCATATAATCTTATGCTCTATATGCTAGCAAGTCATGTTTTAGGATCATGCTGGTATCTGCTATCAATTGAAAGGCAAGATGAGTGTTGGAAGAAAGTTTGTAGTCTTGAGTACCGAAATTGCAAGTACCATTATCTTGAATGTGAGAGCATAGGGGACCTAAGTAGGACTTCATGGCTCAAATCAAGCAATATCTCAAGCCTTTGTGATCAGGACAGTGATTTCTTTCAGTTTGGTATTTTTGCTGATGCTCTTTCTTTGGAAGTTACAGCCTCAGAATTCTTCAGCAAATACTATTATTGTCTTTGGTGGGGACTGAGAAATCTTAGCTCTTTAGGACAGAATCTCTTGACAAGCACGCAAGTGACAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTGTTTGCATTGCTCATAGGCAATATGCAAACATATTTGCAATCAACAACGATGAGACTAGAAGAATGGAGAATAAGGAGAACAGATACAGAAAGATGGATGCACCATAGGCAACTCCCTCGGCATCTGAAGCAAAATGTGAGAAGGTATGACCAATTGAGATGGGTTGCCACTCGTGGTCGCCACCTTTGTCTCAATCTTGTTCGCCAAGTACCATTATTTGATCAGATGGATGAGAGAATCCTAGATGCAATATGTGAGAGGCTAAAACCGTCACTATGTTCCCAAGGGACATGCCTTGTCCGTGAAGGTGACCTTGTCCATGAGATGTTCTTCATAGTAAGAGGCCATTTAGATTCTTGCACCACCAATGGTGGCCGAACCGGCTTCTTCAACTCGTGTCGAATTGGGCCCGGTGACTTCTGTGGTGAGGAGCTTCTCACATGGGCCTTGGACCCGCGTCCAACTGTGGCCCTTCCTTCATCAACAAGAACAGTGAGGGCCATAACTGAAGTTGAGGCCTTTGCACTAATTGCCGAAGACTTGAAATTTGTGGCGGCCCAATTCAGAAGGTTACATAGCAAACAACTTAGGCAAACTTTCAGGTTCCATTCTCATCAATGGAGAACATGGGCTGCATGTTTTATACAAGCAGCTTGGTTTAGGTATAAGAGAATCAAGGAGACAAGTGAGCTCCAGAGAAAGGAGAGTCCAATGATGATCATGATGGCCTGTGGGCCTCGAAATGGGCCTGAGCACTTCTCTGCACCCTTGCAGCCCATGACTGGATCAAGTTTAAGTATGTATTCATCAAAATTGGCAGCAAGCCCAAGGAGAGGTATGAGCCTAAGACATGGGCCTGAGTTTGATATGTTTCTAGGGTCATTGAAGAAGCCACTTGAACCAGACTTTACCGACGATGACGATGATGATAACGATCATGATAATTAA 2184 0.4272 MHELHLIFNAAAASLPFRVTRRRELWLLVVDQDLLFHDDVETEKLTESKEKSHLSMHGYNKIMSGKENDRKDATRGKCLERRRELSRVFSEDYDAEEILILDPRGPRVNRWNRIFLVACLISLFVDPLFFYLPVAKKEMCIDMSIGLEVSLTIIRSIVDAFYIIQIYVRFQTAYVAPSSRVSGRGELIIDSSKIASQYMHKDFWIDLLAAQPLPQVVIWTVIPNLEGSQMFASRHVLSMVTIFQYLLRLYLIYPLSYEIIKTKGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQDECWKKVCSLEYRNCKYHYLECESIGDLSRTSWLKSSNISSLCDQDSDFFQFGIFADALSLEVTASEFFSKYYYCLWWGLRNLSSLGQNLLTSTQVTEINFAVIVAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTERWMHHRQLPRHLKQNVRRYDQLRWVATRGRHLCLNLVRQVPLFDQMDERILDAICERLKPSLCSQGTCLVREGDLVHEMFFIVRGHLDSCTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPTVALPSSTRTVRAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELQRKESPMMIMMACGPRNGPEHFSAPLQPMTGSSLSMYSSKLAASPRRGMSLRHGPEFDMFLGSLKKPLEPDFTDDDDDDNDHDN 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03347 727 MobiDBLite consensus disorder prediction 708 727 - -
Aip02g03347 727 CDD CAP_ED 484 615 IPR000595 -
Aip02g03347 727 Gene3D Jelly Rolls 483 602 IPR014710 -
Aip02g03347 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 717 - -
Aip02g03347 727 Gene3D Helix hairpin bin 427 482 - -
Aip02g03347 727 SMART cnmp_10 484 615 IPR000595 -
Aip02g03347 727 ProSiteProfiles cAMP/cGMP binding motif profile. 484 567 IPR000595 -
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 398 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 155 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 372 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 416 425 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 PRINTS EAG/ELK/ERG potassium channel family signature 283 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip02g03347 727 Pfam Ion transport protein 111 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip02g03347 727 SUPERFAMILY cAMP-binding domain-like 472 602 IPR018490 -
Aip02g03347 727 PANTHER PROTEIN CNGC15A 64 717 - -
Aip02g03347 727 SUPERFAMILY Voltage-gated potassium channels 102 425 - -
Aip02g03347 727 Gene3D - 114 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03347 Aip-Chr2 110130948 110135449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03347 74 718 Ion Channels AT2G28260 61.596 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03347 K05391 - gmx:100815543 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03347 02 110130948 110135449 Aip02g03347 02 110130948 110135449 ECH