Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03342 ATGAAGACAAGGTTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGGGAAGCAAAGTGATACCTTGTACTACTATGTCTGAAGCTTGCGACCAATGTTACCTTAAAAAATACACTAACTTGTGGCCTTCTTCTTCTAATTCATTGGATAAGAGATGCTCCATTCCAAATGATGTTCCAAAGGGTCACTTGGTAGTGTATGTTGGAGAAGAACACAAGAGATTTGTGATCAAAGTTGCATTGCTTCACCATCCACTCTTTAGGGCCTTGTTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCCGATTCCAAACTATGCATTCCTTGTGATGAACACATCTTCCTCAGTGTTCTTCGCTGTGCAAGTTCTCCACAGAATGATCGTGTGTGTTTCTGTCTTTATCTCTGA 411 0.4039 MKTRFLRGCLNKCKKMGSKVIPCTTMSEACDQCYLKKYTNLWPSSSNSLDKRCSIPNDVPKGHLVVYVGEEHKRFVIKVALLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHIFLSVLRCASSPQNDRVCFCLYL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03342 136 Pfam Auxin responsive protein 46 121 IPR003676 GO:0009733
Aip02g03342 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 134 IPR003676 GO:0009733
Aip02g03342 136 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03342 Aip-Chr2 110103017 110103598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03342 57 129 Calmodulin-binding Proteins AT4G34750 45.455 3.98e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03342 K14488 - gmx:100812927 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03342 02 110103017 110103598 Aip02g03342 02 110103017 110103598 ECH