Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03340 ATGAAGTGTTTTCCATTTAACTATGGAGAGAAAAAGGATGATCCTAAGAACTTTCTATCGCTTTCGGGTCGGTCCAACATGTCTACTTATGTTGAGGGTGAGATGAAGAGATCTGGTTCCGAATTGAATTCTCAGGATGTCTCAGACAACAGCACAGATTCCTTCAGGAGGAATGCATTTCCAAGTATGTCACAGAGACCCAGCAACCTCAGAGTATTCTCTGTATCCGAGCTGAAATCAGCCACGAAGAATTTCAGCCGGTCCGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTACAAGGGACTTATCAAGAGTGCTGATGATCCTTCAAGAAAAATTGAAGTTGCAGTCAAACAACTTGGTAAAAGAGGGATTCAGGCAAGGCTTTTTAACTTCTTATCTTACCTCTATTTCACCTCTTCAAAGGAATGGGTCACAGAAGTGAATGTTCTAGGCATAGTTGAGCATCCTAATCTTGTGAAACTAGTTGGATACTGTGCTGAAGACGACGAAAGAGGAATCCAGCGGCTTCTAGTTTACGAATACATGCCAAAAAGAAGTGTTGAACATCATTTATCCCCTAGATCAGAGACTCCTCTGCCATGGAGCATGAGATTGAAGATAGCTCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGATGAGGAGTGGAATGCAAAGCTATCTGACTTTGGTTTAGCAAGATTGGGACCATCTGATGGATTAACTCATGTCTCAACTGCGGTAGTAGGAACAATGGGGTATGCAGCTCCTGAATATGTTCAAACCGGCCGACTCACCTCAAAGAGTGATGTATGGAGCTACGGTGTCTTCCTTTATGAACTCATTACCGGCAGGCGCCCCATCGATAGGAACCGGCCCAAGGCCGAGCAGAATCTGTTGGAATGGATAAGGCCATACCTCTCAGATAGTAGGAAATTTCAAATAATATTGGATCCAAGACTTGAGAGGAAGCACCTCTTAAATATGAGTGAGGTGATAGAAATGCTCAACCAGATCATGGATTCTTATGTAAATGCCAATCCACAGGCACCATTGAGCTTTGTAGAATCAATAGAAGCTTCCCATGACACTGAAATAAACAAGAAGAAAAGGTTCATTATGGACACAAAATCTGCAGATTGTAGACTTGGAGTTTTTCTGAGCTGGGTTGGAGCTGAATCCAAGGTGTATTATTTTGCTGCTACAAAATCATTTCAACATTTATAG 1290 0.4225 MKCFPFNYGEKKDDPKNFLSLSGRSNMSTYVEGEMKRSGSELNSQDVSDNSTDSFRRNAFPSMSQRPSNLRVFSVSELKSATKNFSRSVMLGEGGFGCVYKGLIKSADDPSRKIEVAVKQLGKRGIQARLFNFLSYLYFTSSKEWVTEVNVLGIVEHPNLVKLVGYCAEDDERGIQRLLVYEYMPKRSVEHHLSPRSETPLPWSMRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEEWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKAEQNLLEWIRPYLSDSRKFQIILDPRLERKHLLNMSEVIEMLNQIMDSYVNANPQAPLSFVESIEASHDTEINKKKRFIMDTKSADCRLGVFLSWVGAESKVYYFAATKSFQHL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03340 429 PANTHER KINASE 1B 12 348 - -
Aip02g03340 429 Gene3D Phosphorylase Kinase; domain 1 57 183 - -
Aip02g03340 429 PANTHER KINASE 1B 349 402 - -
Aip02g03340 429 MobiDBLite consensus disorder prediction 30 59 - -
Aip02g03340 429 Pfam Protein kinase domain 87 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03340 429 SUPERFAMILY Protein kinase-like (PK-like) 61 356 IPR011009 -
Aip02g03340 429 Gene3D Transferase(Phosphotransferase) domain 1 184 402 - -
Aip02g03340 429 PANTHER OS01G0588500 PROTEIN-RELATED 349 402 - -
Aip02g03340 429 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Aip02g03340 429 ProSiteProfiles Protein kinase domain profile. 85 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03340 429 CDD STKc_IRAK 91 360 - -
Aip02g03340 429 PANTHER OS01G0588500 PROTEIN-RELATED 12 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03340 Aip-Chr2 110081300 110086566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03340 1 343 Glycoside Hydrolase AT3G07070 44.068 1.15e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip02g03340 Pkinase 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03340 - - gmx:100305438 632.869