Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03334 ATGGCTAAGTCCTACTATCTTGGAAAGGTGAAAAGGGGTATCTCAAACTTGGTGCATCACAGAAGGGCTAAATCACTAAGTTACATTAGTGATGATGATGAAGATGTTATTATTACCACTACTACTAGTAATAATAATAATAATAACAATAATACTAAGGAAGGGTACTTAACTGTTGTTGCTGAAAAGGGTAGAGAGAAAAAGAGGTTCAGTATTGAGTTGGATTACCTGAATGATCCTGAATTCAAGTTGCTGCTTGATCAAGCTCAGCAAGAATATGGTTTCAGACAGAAGGGAGCTCTTTCTGTCCCTTGCAGGCCTCATGAACTCCAAAAGATTTTGGATGGTGGCAATGAAAGAAGGTTGAGTAGGTCATAA 378 0.3783 MAKSYYLGKVKRGISNLVHHRRAKSLSYISDDDEDVIITTTTSNNNNNNNNTKEGYLTVVAEKGREKKRFSIELDYLNDPEFKLLLDQAQQEYGFRQKGALSVPCRPHELQKILDGGNERRLSRS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03334 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 5 117 - -
Aip02g03334 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 117 IPR003676 GO:0009733
Aip02g03334 125 Pfam Auxin responsive protein 40 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03334 Aip-Chr2 110051147 110051524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03334 13 106 Calmodulin-binding Proteins AT3G43120 34.043 9.34e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03334 - K14488 aip:107628081 228.024