Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03327 ATGTCACAACAAGATTCTGAGGAAGAGATAAAGACCATTGAACATTGGAAATGGTCTGAAATGCAAGGACTTGAGCTTGTTCCAGGAGAATCACAACCACCACCACCACCAACAACAACAAGAACAGCATCAATGGAGGAAGAACAAAGAGGAGAACAATACAAGGAGCAAGAAAAAATGGTGGAGAAGGTCACTTCAGAAGCAAATAGAGATGGTGGTGCTGCTACTAGTACTAGTGGTGGTGGAGAAAAAGGTGAAAGTGTTGAACCTGTTGGGTTTGGTGAGCTTTTCAGATTTGCTGATTCATTGGATCACATCCTAATGGGAATTGGAACAATTGGAGCAATGGTACATGGATGTTCATTGCCACTGTTCTTAAGGTTCTTTGCTGATCTTGTGAACTCTTTTGGTTCCAATGCCAATAATGTGGACAAGATGACCCAGGAAGTTGTTAAGTATGCATTTTACTTCCTTGTTGTTGGTGCTGCTATATGGGCATCATCATGGGCAGGTGAATTTTCTTCTTTTTTTTTTCCCCTTTTTTTCCTCCAAATTGTTGGGCTAATGATTTTGTTTTTGTTTGCAGAGATTTCATGTTGGATGTGGACAGGTGAGAGGCAATCAACAAGGATGAGGATCAAGTATCTTGAAGCTGCTTTAGAACAAGACATTCAATTCTTTGACACAGAGGTTAGAACCTCAGACGTTGTTTCTGCAATCAACACTGATGCTGTCATGGTCCAAGATGCCATTAGTGAGAAGTTGGGTAATTTCATTCACTACTTTGGCACATTTATTTCTGGGTTTGCTGTGGGATTCAGTGCTGTGTGGCAATTAGCACTGGTCACTCTTGCTGTAGTTCCTATGATAGCTGTCATTGGAGCCATTCATACAACCACTTTGGCCAAGCTCTCTGCTAAAAGCCAAGAAGCTCTTTCTCAAGCAGGCAACATTGTTGAACAGATTGTTGTTCAAATCAGAGTGGTGTTGGCATTTGTTGGGGAGAATAGAGCACTGCAAGGTTACTCATCTGCACTGAGGATTGCTCAGAAGCTTGGATACAAAACTGGATTTGCAAAGGGAATGGGATTGGGTGCTACTTACTTTGTTGTTTTCTGCTGCTATGCTCTTTTGCTTTGGTATGGTGGATATCTAGTTAGGCATCACTACACCAATGGAGGATTAGCCATTGCAACCATGTTTGCTGTTTGTATTGGTGGATTGGCTTTAGCCCAGTCTGCACCAAGCATAGCTGCATTTACAAAGGCCAGAGTGGCAGCTGCGAAAATTTACCGCGTGATCGATCACAAGCCGGCTATAGAGAGAAACAATGAATCCGGTGTGGAGTTAGACAGTGTCACAGGACTAGTGGAGCTGAAAAATGTGGACTTTTCATATCCATCTAGGCCAGATGTTAGGATTCTCAACAATTTCACCTTAAGCGTGCCTGCCGGCAAGACCATAGCCTTGGTGGGAAGCAGCGGCTCCGGAAAGAGCACGGTTGTGTCCCTCATAGAGAGATTCTATGACCCTTCATCAGGACAAGTTTTGTTAGATGGGAATGATGTTAAGAGTTTGAAGCTAAAATGGTTGAGGCAGCAAATAGGACTAGTGAGCCAAGAACCGGCTTTGTTTGCGACGACAATTAGAGAAAACATACTCTTAGGAAGATCTGATGCTGACCAAGTTGAGATTGAAGAAGCTGCAAGAGTAGCCAATGCTCATTCTTTCATTATCAAACTTCCAGAAGGTTATGAAACACAGGTAGGTGAAAGGGGGTTGCAACTTTCAGGAGGCCAAAAGCAGAGAATTGCTATAGCAAGGGCAATGCTGAAGAACCCAGCAATTCTTCTCCTAGATGAGGCGACAAGTGCGTTGGACTCCGAGTCAGAAAAGCTTGTGCAAGAAGCACTTGATAGGTTTATGATTGGTAGAACAACACTTGTGATTGCACACCGCCTTTCCACGATTCGCAAAGCTGACCTTGTTGCAGTACTTCAGCAAGGAAGTGTATCAGAAATTGGAACTCATGATGAGCTTTTCGCCAAAGGCGAAAATGGAGTCTATGCCAAGCTTATCAGGATGCAAGAGGCTGCCCATGAAACTGCCATGAGTAATGCTAGAAAGAGTAGTGCAAGGCCTTCGAGTGCAAGAAACTCTGTAAGTTCACCTATTATTGCTCGGAACTCTTCTTACGGCCGGTCACCATACTCAAGAAGGCTATCTGACTTCTCCACATCGGATTTTAGTCTTTCCATTGATGCATCACATCCAAATTACAAGCTCGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGAGACTTGCAAAGATGAACTCTCCTGAATGGCTCTATGCTTTAATTGGTTCTATAGGTTCAGTTGTTTGTGGATCCCTTAGTGCCTTCTTTGCTTATGTTCTTAGTGCTGTTCTCAGTGTCTATTACAATCCAAACCACAGACACATGATCCGAGAAATAGAAAAGTACTGCTACTTGTTAATAGGACTTTCATCCGCAGCTCTTATCTTCAATACATTGCAGCATTTCTTCTGGGATATTGTTGGGGAAAATCTCACGAAACGAGTGAGGGAGAAAATGTTCAGTGCAGTGCTCAAGAACGAAATGGCATGGTTCGATCAGGAAGAAAATGAGAGTGCTAGAATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGAATTTCGGTAATTGTGCAGAACACTGCACTTATGTTGGTTGCTTGCACTGCAGGGTTTGTACTACAGTGGCGCCTTGCTCTCGTCCTTGTAGCCGTCTTCCCAGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTTGAAGCTGCTCATGCTAAGGCCACACAACTTGCTGGGGAGGCTATAGCCAATGTAAGGACTGTTGCAGCCTTTAATTCAGAAAAGAAAATCGTAGGACTTTTCGTCTCGAACCTTGAAATTCCTCTACGACGCTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGGATAGCACAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTCATGGTCTCGGCTAATGGTGCTGCTGAAACTTTAACTCTGGCTCCTGACTTCATCAAGGGGGGTAGAGCCATGAGGTCTGTCTTTGAACTCCTTGACCGCAGAACTGAAATTGAGCCGGATGATTCTGATGCTACACCTGTTCCTGACCGGCTTCGTGGTGAAGTTGAGCTGAAACATGTTGACTTCTCTTACCCTACTCGGCCGGATATGCCTGTTTTCCGGGACCTCAGTCTTCGTGCAAGAGCAGGTAAAACTCTAGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATCCAGAGGTTCTATGATCCATCTTCCGGTCGAGTCATGATTGATGGAAAGGACATAAGGAAATACAACCTTAAGTCCCTAAGAAGGCACATTGCTGTGGTGCCTCAAGAACCATGCTTGTTTGCTACTTCAATATATGAAAACATTGCTTATGGCCATGACTCGGCTACTGAAGCCGAGATCATTGAGGCTGCTACTCTTGCCAACGCGCACAAGTTCATATCCGGCCTGCCTGAAGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAGCTATCAGGAGGACAAAAGCAAAGAATAGCTATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTCATGCTTCTCGACGAAGCAACAATGATTGATGATGGGAAAGTAGCAGAACAAGGATCACATTCACAGTTGCTGAAGAATCACCCTGATGGGATCTATGCAAGAATGATTCAGTTACAAAGATTCTCAAACAACCAAGTCATTGGTGTTGCCTCAAGTTCAAGCTCCTCAACAAGACCAAACGATGATCAAAGGGAAAGCTAG 4014 0.4412 MSQQDSEEEIKTIEHWKWSEMQGLELVPGESQPPPPPTTTRTASMEEEQRGEQYKEQEKMVEKVTSEANRDGGAATSTSGGGEKGESVEPVGFGELFRFADSLDHILMGIGTIGAMVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAGEFSSFFFPLFFLQIVGLMILFLFAEISCWMWTGERQSTRMRIKYLEAALEQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYFGTFISGFAVGFSAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSAKSQEALSQAGNIVEQIVVQIRVVLAFVGENRALQGYSSALRIAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVCIGGLALAQSAPSIAAFTKARVAAAKIYRVIDHKPAIERNNESGVELDSVTGLVELKNVDFSYPSRPDVRILNNFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGNDVKSLKLKWLRQQIGLVSQEPALFATTIRENILLGRSDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEAAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSIDASHPNYKLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIREIEKYCYLLIGLSSAALIFNTLQHFFWDIVGENLTKRVREKMFSAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFVSNLEIPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDSDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPSSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATSIYENIAYGHDSATEAEIIEAATLANAHKFISGLPEGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATMIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFSNNQVIGVASSSSSSTRPNDDQRES 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03327 1337 Pfam ABC transporter transmembrane region 790 1059 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g03327 1337 Pfam ABC transporter transmembrane region 109 403 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g03327 1337 MobiDBLite consensus disorder prediction 1 87 - -
Aip02g03327 1337 CDD ABC_6TM_Pgp_ABCB1_D2_like 778 1094 - -
Aip02g03327 1337 Gene3D - 455 720 IPR027417 -
Aip02g03327 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 457 693 IPR003439 GO:0005524
Aip02g03327 1337 SUPERFAMILY ABC transporter transmembrane region 96 435 IPR036640 GO:0005524|GO:0016021
Aip02g03327 1337 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1279 1314 - -
Aip02g03327 1337 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 108 174 - -
Aip02g03327 1337 Pfam ABC transporter 475 624 IPR003439 GO:0005524
Aip02g03327 1337 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1279 1314 IPR039421 -
Aip02g03327 1337 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 789 1076 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g03327 1337 ProSitePatterns ABC transporters family signature. 596 610 IPR017871 GO:0005524
Aip02g03327 1337 ProSitePatterns ABC transporters family signature. 1251 1265 IPR017871 GO:0005524
Aip02g03327 1337 Gene3D ABC transporter type 1, transmembrane domain 182 1085 IPR036640 GO:0005524|GO:0016021
Aip02g03327 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 696 IPR027417 -
Aip02g03327 1337 CDD ABC_6TM_Pgp_ABCB1_D1_like 108 430 - -
Aip02g03327 1337 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 181 1278 - -
Aip02g03327 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1103 1310 IPR027417 -
Aip02g03327 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1112 1337 IPR003439 GO:0005524
Aip02g03327 1337 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 181 1278 IPR039421 -
Aip02g03327 1337 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 108 174 IPR039421 -
Aip02g03327 1337 SMART AAA_5 1139 1322 IPR003593 -
Aip02g03327 1337 SMART AAA_5 484 670 IPR003593 -
Aip02g03327 1337 Pfam ABC transporter 1131 1278 IPR003439 GO:0005524
Aip02g03327 1337 CDD ABC_MTABC3_MDL1_MDL2 457 696 - -
Aip02g03327 1337 Gene3D - 1103 1279 IPR027417 -
Aip02g03327 1337 SUPERFAMILY ABC transporter transmembrane region 776 1096 IPR036640 GO:0005524|GO:0016021
Aip02g03327 1337 MobiDBLite consensus disorder prediction 45 66 - -
Aip02g03327 1337 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 110 422 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03327 Aip-Chr2 109974982 109981444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03327 33 1332 Calmodulin-binding Proteins AT2G36910 81.520 0.0 2188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03327 K05658 - gmx:100777382 2185.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03327 02 109974982 109981444 Aip02g03327 02 109974982 109981444 ECH