Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03270 ATGGAACCAGCAAACGGGCTCGTTCCATTGGTGTTTCCGAGGGTTTCTGCGCGTCACAAAGGAGATCGAGGAACACGCGAAGCAGCTGCAGCAGCAACCATGGTGCTCAAGACCGAACTTTGCCGTTTCAGCGGCCAGAAGATCTACCCTGGCAAAGGCATCAGATTCGTCCGCGGTGATTCACAGGTCTTTCTGTTTGCCAATTCCAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCGTCGAAGCTTACATGGACAGCCATGTATAGGAAGCAACATAAGAAGGACATTGCACAAGAAGCCGTGAAGAAGAAGCGCCGTGCCACCAAGAGGCCTTACTCCAGGTCCATTGTTGGTGCCACTTTGGAAGTTATCCAGAAAAGGAGGACTGAGAAGCCGGAGGTTCGAGATGCTGCTAGAGAAGCTGCTCTTCGTGAAATCAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAACTACGGCAAAGTCCCAAAAGTCCCAAGGCAAAGCTAATGTTTCCAAGGGTGCTCAACCAAAAGGCCCTAAGCTCGGCGGTGGTGGCGGCAAGCGCTGA 594 0.5101 MEPANGLVPLVFPRVSARHKGDRGTREAAAAATMVLKTELCRFSGQKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATKRPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAETTAKSQKSQGKANVSKGAQPKGPKLGGGGGKR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03270 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 39 91 - -
Aip02g03270 197 Gene3D Ribosomal protein L24e 36 97 IPR038630 -
Aip02g03270 197 MobiDBLite consensus disorder prediction 150 197 - -
Aip02g03270 197 Pfam Ribosomal protein L24e 37 100 IPR000988 -
Aip02g03270 197 Gene3D - 102 183 - -
Aip02g03270 197 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 34 197 - -
Aip02g03270 197 Coils Coil 145 169 - -
Aip02g03270 197 CDD Ribosomal_L24e_L24 36 89 IPR000988 -
Aip02g03270 197 MobiDBLite consensus disorder prediction 150 169 - -
Aip02g03270 197 PANTHER 60S RIBOSOMAL PROTEIN L24 34 197 IPR000988 -
Aip02g03270 197 ProSitePatterns Ribosomal protein L24e signature. 43 60 IPR023442 -
Aip02g03270 197 SMART 4TRASH 41 79 IPR011017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03270 Aip-Chr2 109496702 109500803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03270 34 190 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 4.65e-86 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03270 K02896 - gmx:100499884 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03270 02 109496702 109500803 Aip02g03270 02 109496702 109500803 ECH