Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03266 ATGGCCTCTTGCGACGACGACGATGACGACGGATTCTCTCTCCTCCACCAACCCTACGCGCCACCGTCCCACCACCACAACTACTCCACCGCCGTCGCCGCCGCCACAACCGCCGTGCAACCTAAACCTGTCTCCGACACCGACGCCGAGGATTACAGCAATCCCTTCGACGAAGACAACACCACCACCACCCACGCCAACGCCAACACCACCGAGAAGAGAAAAGATCAAGACGAGATCGGCAACAACAATAACAGCAACGATGCATCATACGGTTTCAACAAACGATCTAAGCTTACGGCGAGCGCCGCCGGATCGGGATCCGCCTGCTCCGGCGCCGAGTACCGGAAAGACAGGGAGGAGTGGAGCGACACGGCGATCGTGTGTTTGCTAGATGCGTACACGGAGAAGTTCACCCAGCTGAATCGGGGGAATCTGAGAGGGAGGGACTGGGAGGAGGTAGCGGCGGTGGTTTCGGAGCGATGCGAGAACCAGTCGAAGAGCGTGGagcagtgcaagaacaaggtggataatctgaagaagaggtacaaactcgagaggcacaggatcagcagcggatgcatcaCCGCGAGCCACTGGCCTTGGTTCAAGCACATGGAGAACATCGTCGGGAACTCGCTTTCTGCAGGGAAGTTCGCCGGCGGCGATGAGGACAAGGCCATCGTCGCCTCCACCGCTGGGAACTCCCCTCGGCAACCGAAGAGATATGGAGGGGCATCACAAAGCAGTGGAGGACAAGTGAATAACATGAAGTCCAAAGCATTGTCGAACCTTAGATGGCGAAGAGTAATCCTGAAAATTAGTGGTGCTGCCCTTACTGGATCTGATACCTGCAATATTGACCCAAAGGTAGCTATGTTAATCTCAAGAGAAGTTGCAATAGCTTCCCGCCTTGGTGTTGAGGTCGCCATTGTTGTTGGAGGTCGGAATTTCTTCTGTGGGGATGCATGGGTAGCTGCAACAGGATTAGAAAGATGTAGTGCATACCAAGTTGGAATGATGGCAACTATGATGAATTCAATATTGCTCCAATCAACTCTAGANNNNNNNNGCACCGAGCCATCAGACATCTTGAGAAAGGAAGAAGCTTCAGAGCTAAATGCTGAAGCTGTTCTCAAGGGTACCAATGTAGATGGTGTATATGACTGCAACTCCAGAGACAACAATTTCACTTTTGAGCACATTTCCTTCAGGGAGCTGGTATCAAGAGGAGTCACTCCTATGGACATGACAGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTCAATATATTGGAGCCTGGGAACATATCAAAGGCTTTGTGTGGAGAACAAGTTGGAACACTAGTTGACCAAACTGGAGCAATAAGCTAA 1386 0.4863 MASCDDDDDDGFSLLHQPYAPPSHHHNYSTAVAAATTAVQPKPVSDTDAEDYSNPFDEDNTTTTHANANTTEKRKDQDEIGNNNNSNDASYGFNKRSKLTASAAGSGSACSGAEYRKDREEWSDTAIVCLLDAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRISSGCITASHWPWFKHMENIVGNSLSAGKFAGGDEDKAIVASTAGNSPRQPKRYGGASQSSGGQVNNMKSKALSNLRWRRVILKISGAALTGSDTCNIDPKVAMLISREVAIASRLGVEVAIVVGGRNFFCGDAWVAATGLERCSAYQVGMMATMMNSILLQSTLXXXXTEPSDILRKEEASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVTPMDMTALTFCEENAIPVVVFNILEPGNISKALCGEQVGTLVDQTGAIS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03266 461 Gene3D - 366 455 IPR036393 -
Aip02g03266 461 MobiDBLite consensus disorder prediction 29 43 - -
Aip02g03266 461 PANTHER URIDYLATE KINASE 43 355 - -
Aip02g03266 461 Coils Coil 162 189 - -
Aip02g03266 461 Gene3D - 257 365 IPR036393 -
Aip02g03266 461 MobiDBLite consensus disorder prediction 232 256 - -
Aip02g03266 461 PANTHER URIDYLATE KINASE 369 461 - -
Aip02g03266 461 Pfam Myb/SANT-like DNA-binding domain 119 208 IPR044822 -
Aip02g03266 461 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 43 355 IPR011817 GO:0006221|GO:0009041
Aip02g03266 461 Pfam Amino acid kinase family 370 434 IPR001048 -
Aip02g03266 461 Gene3D - 122 185 - -
Aip02g03266 461 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 369 461 IPR011817 GO:0006221|GO:0009041
Aip02g03266 461 MobiDBLite consensus disorder prediction 231 256 - -
Aip02g03266 461 MobiDBLite consensus disorder prediction 1 93 - -
Aip02g03266 461 SUPERFAMILY Carbamate kinase-like 266 454 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03266 Aip-Chr2 109453846 109457012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03266 99 213 Trihelix Transcription Factor Family AT3G14180 36.975 2.81e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip02g03266 Myb_DNA-bind_4 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03266 - - gmx:100805176 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03266 02 109453846 109457012 Aip02g03266 02 109453846 109457012 ECH