Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03265 ATGAACAAGCTCTTGTTCTTCACCATCATCACCACCATTATTATTGTTCTTACACCACAACAAGCATTGAGCCACCACAATGACACACATGCACTCACCCTCTTCCGCCTCCAAGCCGACATCCACGGCCACCTCCTCCCTAACTGGACCGGCGCCGACGCCTGCTCCTCGGCCGCGCCATGGCGCGGAGTTTCTTGCTCCCCAAACAACCGTGTCACCACACTCTCCCTACCTTCCCTTAACCTTAGAGGACCCTTAACACCTCTCTCCTTCCTCACTCACCTTCGCTTCCTTGATCTTCACGACAACCGTTTAAACGGCACCATTGCACCTTTGATCTCCAATTGCACCAACCTCATCCTTCTCTATCTCTCCGGCAACGATCTCTCCGGCGAGATTCCACCGGAGATATCTTCTGTCACCGGCCTCCTCCGCCTCGACCTATCTGGCAACAACATCGGTGGCAAGGTTCCAAAGGAACTGTTGAATTTGACAAAGCTTCTTACTCTGAGGCTTCAAGACAATGTGCTCAGTGGCTTCATACCTGACTTCTCATCTTCCATGGAGAATCTCAGTGAGCTCAACATGACCAACAATGAGTTATATGGAAAGTTGCCTGACCAAATGCTCAAGAAGTTTGGTGCTGAAAGCTTCTATGGAAATGAGGGTCTATGTGGTGCAAGCCCACTACCTGTTTGTTCATTTGCCAATGAGAATTCTCCTCCTAATTATGGTGGTGAAGATGGTCATGATGATGATTTGGGACAAACTGTTCCTTCAAATCCAAGCTCAATGCCACAAACAAGTGAGGTTGCAAGGCCAGGAACACCACACCACCATCATAAAGGGTTAAGCCCTGGTGCCATTGTAGCCATTGTTTTGGCGAATTGTGTTGCATTGGTGGTGGTAACATCTTTTCTTGTTGCTCAATGTTGTGGAAGAGAAAGAGGGTCCAATTCTGGTTCCTATGTTGGAAGTGAGAGTGGTAAGAGGAAGAGTAGTGGAAGTAGTACTAGCGGCGGCTACGGCAGTGAAAAGAACAAGAACAAGAACAGGAACAAGAACAAGAAGGTTTATGCAAATGGTGTTGTTGTTAATGGTGGTGGTGATAGTGATGGAACTAGTGGAAGTGATGGAAGCAAGCTTGTGTTCTTTGATAGGAGGAACCAGTTTGAGCTTGAGGATCTGCTAAGAGCTTCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTGTATAGGGCAGTGCTTGATGATGGTTGCACTGTTGCAGTTAAAAGGCTTAAAGATACAAACCCTTGTGTAAGGCATGAATTTGAACAATACATGGAGGTTATAGGGAGGTTGAAGCATCCAAACATTGTTAGACTCAGAGCATATTACTATGCCAAGGAAGAGAAGCTTCTTGTCTATGATTATCTCCCCAATGGAAGCCTCCATGCTCTTCTTCATGGGAACCGTGGCCCTGGAAGAATTCCATTAGATTGGACCACAAGAATAAGCTTGGTGTTAGGAGCAGCTAGAGGCCTTGCTAGGATCCATGCAGAGTATAGTTCAGCCAAAGTGCCTCATGGAAATGTGAAATCTTCCAATGTGCTTCTTGACAAGAATGGTGTTGCTTGCATCTCAGACTTTGGTTTATCCCTTCTATTGAACCCTGTTCATGCCATTGCAAGGTTGGGAGGGTACAGAGCTCCAGAACAGGCCGAACAAAAGAGGCTGTCTCAGCAGGCTGATGTGTATAGTTTTGGTGTCTTGCTTTTGGAAGTCCTAACTGGAAGGGCTCCCTCATCGGCTTACCCTTCTCCTGCTCGCCCTCGTGGTGGCCCAGATGACGAGGAAGAACTTGCTTTGGATCTTCCTAAATGGGTTCGGTCGGTCGTGAAGGAAGAGTGGACCGGTGAAGTGTTTGATCAGGAGTTATTGAGGTACAAGAACATTGAGGAGGAGCTTGTTTCAATGCTGCATGTTGGGTTGGCTTGTGTGGCGCTGCAGCCGGAGAAGAGGCCAACGATGGCAGAAGTTGCAAAGATGATTGAAGAGATCAGGGTGGAGCAATCACCCCTTGGAGAGGACTATGATGAATCAAGGAATTCACTTTCACCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAA 2139 0.4755 MNKLLFFTIITTIIIVLTPQQALSHHNDTHALTLFRLQADIHGHLLPNWTGADACSSAAPWRGVSCSPNNRVTTLSLPSLNLRGPLTPLSFLTHLRFLDLHDNRLNGTIAPLISNCTNLILLYLSGNDLSGEIPPEISSVTGLLRLDLSGNNIGGKVPKELLNLTKLLTLRLQDNVLSGFIPDFSSSMENLSELNMTNNELYGKLPDQMLKKFGAESFYGNEGLCGASPLPVCSFANENSPPNYGGEDGHDDDLGQTVPSNPSSMPQTSEVARPGTPHHHHKGLSPGAIVAIVLANCVALVVVTSFLVAQCCGRERGSNSGSYVGSESGKRKSSGSSTSGGYGSEKNKNKNRNKNKKVYANGVVVNGGGDSDGTSGSDGSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDTNPCVRHEFEQYMEVIGRLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSSAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQAEQKRLSQQADVYSFGVLLLEVLTGRAPSSAYPSPARPRGGPDDEEELALDLPKWVRSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVALQPEKRPTMAEVAKMIEEIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03265 712 CDD STKc_IRAK 404 682 - -
Aip02g03265 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 703 - -
Aip02g03265 712 Gene3D Phosphorylase Kinase; domain 1 375 473 - -
Aip02g03265 712 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Aip02g03265 712 Gene3D Ribonuclease Inhibitor 142 216 IPR032675 -
Aip02g03265 712 MobiDBLite consensus disorder prediction 317 346 - -
Aip02g03265 712 ProSiteProfiles Protein kinase domain profile. 398 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03265 712 MobiDBLite consensus disorder prediction 317 377 - -
Aip02g03265 712 SUPERFAMILY Protein kinase-like (PK-like) 402 680 IPR011009 -
Aip02g03265 712 MobiDBLite consensus disorder prediction 256 271 - -
Aip02g03265 712 Gene3D Transferase(Phosphotransferase) domain 1 474 700 - -
Aip02g03265 712 SUPERFAMILY L domain-like 26 209 - -
Aip02g03265 712 MobiDBLite consensus disorder prediction 238 282 - -
Aip02g03265 712 Pfam Protein kinase domain 402 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03265 712 MobiDBLite consensus disorder prediction 686 712 - -
Aip02g03265 712 PANTHER LRR RECEPTOR-LIKE KINASE 7 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03265 Aip-Chr2 109449934 109453075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03265 26 708 Receptor kinase-like Gene Family AT2G36570 65.797 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip02g03265 Pkinase 9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03265 - - gmx:102660494 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03265 02 109449934 109453075 Aip02g03265 02 109449934 109453075 ECH
Aip06g01905 06 68602028 68604957 Aip02g03265 02 109449934 109453075 PCT