Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03262 ATGGCAGAAACTCTAAGCACCTCAATTTCTGCATCAATGGCATCCCTTTCATCACCAAAACAAGCTCAAGAACCTGCTATGATGAACATGAAAGTGGAAACCAACGCTGGAGCTACACCACCACTCCCACCACCACCACCACAACCAATAGCAGTAGCAACAATGGCTACAACAAGTGGGAGCTTAGAGAATAAGAAGCTGAAGAAGAAGAGAGGAAGGCCAAGGAAGTATGACTTAAATGGGATCATGGGGTTGACATGTCCTCCAAATGCAGAATCAATGACTATGACATTTGCATCAGCACCACAGTCTCATTTTGGTGAGGTTGCAAATTTGGATGGTGCATGCTTTACACCACATGTGGTGAATCTTCATGCTGGAGAGGATGTTGCTGAAAAGATCATGTTATTCGTCGAAAAGTATCCAGGAGGAATTTGTGTTCTTTCTGCCACTGGAGCAATCTCTAGTGTTACCTTAGACCGTTTTGGTTCTTCTGGTGGTTTGTGGACTTATGAGGTATGA 522 0.4406 MAETLSTSISASMASLSSPKQAQEPAMMNMKVETNAGATPPLPPPPPQPIAVATMATTSGSLENKKLKKKRGRPRKYDLNGIMGLTCPPNAESMTMTFASAPQSHFGEVANLDGACFTPHVVNLHAGEDVAEKIMLFVEKYPGGICVLSATGAISSVTLDRFGSSGGLWTYEV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03262 173 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g03262 173 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 158 IPR005175 -
Aip02g03262 173 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 9 172 - -
Aip02g03262 173 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 172 IPR039605 GO:0003680
Aip02g03262 173 CDD DUF296 118 166 IPR005175 -
Aip02g03262 173 ProSiteProfiles PPC domain profile profile. 114 173 IPR005175 -
Aip02g03262 173 Gene3D - 119 172 - -
Aip02g03262 173 MobiDBLite consensus disorder prediction 1 49 - -
Aip02g03262 173 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03262 Aip-Chr2 109408816 109410025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03262 45 172 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 37.423 3.26e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03262 - - aip:107626418 315.079