Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03261 ATGGTTAATGGTCGATATGAGATTTTACGTTTATCTGGATCATACACAATCGTAGAGAATTGTGGCATGAGAAGTAGGACTGGTGGACTGAGTATCATGCTAGTCAATCCTAACGGCCATGTTTTTGGCGGCGGCATTGCTGGTGTGTTAACTGCTGCTAGCCCCGTTCAACTTGTACTAGGGAGCTTCAGGACACATGTTAGCAAAACCCCTAGAAGGAAGCGCGGCGGCCATGAACACACTACGAGTCAGCTTGTAGTGGCTGCGCCGATTGCAGGCGATCTAGAGACACCGATAGAGGCAAGGCCTATCTCACAAGCAAATCCTAATTAA 333 0.4805 MVNGRYEILRLSGSYTIVENCGMRSRTGGLSIMLVNPNGHVFGGGIAGVLTAASPVQLVLGSFRTHVSKTPRRKRGGHEHTTSQLVVAAPIAGDLETPIEARPISQANPN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03261 110 CDD DUF296 2 63 IPR005175 -
Aip02g03261 110 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 3 109 - -
Aip02g03261 110 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 64 IPR005175 -
Aip02g03261 110 ProSiteProfiles PPC domain profile profile. 1 84 IPR005175 -
Aip02g03261 110 MobiDBLite consensus disorder prediction 67 87 - -
Aip02g03261 110 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 70 - -
Aip02g03261 110 Gene3D - 1 88 - -
Aip02g03261 110 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 109 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03261 Aip-Chr2 109397649 109398471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03261 4 91 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 50.000 4.53e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03261 - - aip:107626418 216.083