Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03246 ATGGCTCAGAAGAAGAACAAGCACTTCTTACACGAGCTTCTAAGCGAAGATCAAGAGCCATTCCTCCTCAACAATTACATCTCAGACAAGCAAAACCAGCTCACAATTCATTTTTCTAAGCAAAAACCAGGAACCCTAAAAACCTCAACTTTATTCCCAATTCATCACCTCTGCAAGAACGCTCTCTGCTTCAATTACTCTTCCACAGCACCACCAACAACCACACCTGATATCACCAAATCCCCGCTATTCAGAATCTCGCAACGGAGTAGTACTAAGAGTCCGTGCAGTGCACGTGCTTCTTCCCCCAACGCAATGTTCCTTCATGTTCCTGCAAGAACAGCTTCCATTCTTCTAGAAGCTGCGCTTCGGATTCAGAAGCACTCCAATTCCAGAAACACCAATGGATTTGGCTTCTTCGGTTCCTTCTTTAGGAGATTCACGCACAGGGGAAGAAGGAACAAGAGGCAAATTCAGAGTAATGATAACAATGTGAAGAGGAAGAAGAAGGTGAAGGATATCTTGAAATTCGAGCTAGATTTGGGAAGAAGAACAACAACAAAGGAAGAAGAAGAGAACAAGAAGAAGGAGAATGTTATGGTGGACGCTAGTGGTGTGGGGTTCAGGTGTTCCTGCAGTGAAGAAGGGGTGTGTTCTTCGAGTAGTGTTCATGATGATGATGATAATGACTTATTCTGTGAAAGCCCTTTCCGTTTTGTTCTTCAACGGAGTCCTTCCGCCACCTCCTCCTCCGGCCGCCGTACGCCGGAGTTCTCCTCGCCGGCATCGTCTCCAAATCGCCACAGAACAGAGGACAAAGAACATAATAATAATAATGGAGATGATAGCATCAACAAATTCCAATCAGGGAAGCAAGAAGAAGAAGAAGAAGAAAAAGAACAATGTAGTCCTGTATCAGTTTTAGACCCACCATTTGAGGATGATGATGATGTTCATGAAAGCAATGATGATGATGAGGAAGGTTTTGATTTGGATTGTAGCTACGCCAATGTACAGAGAACAAAGCAACAACTATTATACCGGCTAAGTAGATTTGAGAAATTGGCTGAGTTAGATCCATTGGAACTTGAGCAAAGAATGTTAGATCAAGAAAACAACCAGTATGGAACATATATCAACGAGGATAGTTGCGGAGACGGCGATAGCGAATTGTCACATGAAGAAAAGGAATTGAGAGAAATAGTGTATGCAATCGTCAACCAATCAAGCAGATGGCGAGTTCCGGAGGATCTCAAGAGACTAGTTTATGATCTCATTATGGAGGAAGAGATTGCGGAATTTGATTGCCCAAGAGATAAGGAGATGGTGATAGAAAGGGTTTGTAAGAGGTTGGAACTATGGAAGGAAGTGGAGTCCAACACCATTGATATGATGATAGATGAGGACTTCTCAAGAGAGGAAAGTGGGTGGAAGAAAAATTCACAACAGGTAAGAGACTTGGCTGGAGAACTTGAGCTTGCTATCTTTGCCCTTTTAATGGAGGAATTTTCAGAGGAACTAGTGTATTAA 1530 0.4281 MAQKKNKHFLHELLSEDQEPFLLNNYISDKQNQLTIHFSKQKPGTLKTSTLFPIHHLCKNALCFNYSSTAPPTTTPDITKSPLFRISQRSSTKSPCSARASSPNAMFLHVPARTASILLEAALRIQKHSNSRNTNGFGFFGSFFRRFTHRGRRNKRQIQSNDNNVKRKKKVKDILKFELDLGRRTTTKEEEENKKKENVMVDASGVGFRCSCSEEGVCSSSSVHDDDDNDLFCESPFRFVLQRSPSATSSSGRRTPEFSSPASSPNRHRTEDKEHNNNNGDDSINKFQSGKQEEEEEEKEQCSPVSVLDPPFEDDDDVHESNDDDEEGFDLDCSYANVQRTKQQLLYRLSRFEKLAELDPLELEQRMLDQENNQYGTYINEDSCGDGDSELSHEEKELREIVYAIVNQSSRWRVPEDLKRLVYDLIMEEEIAEFDCPRDKEMVIERVCKRLELWKEVESNTIDMMIDEDFSREESGWKKNSQQVRDLAGELELAIFALLMEEFSEELVY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03246 509 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 6 508 - -
Aip02g03246 509 MobiDBLite consensus disorder prediction 266 280 - -
Aip02g03246 509 MobiDBLite consensus disorder prediction 287 303 - -
Aip02g03246 509 MobiDBLite consensus disorder prediction 243 265 - -
Aip02g03246 509 MobiDBLite consensus disorder prediction 243 331 - -
Aip02g03246 509 PANTHER OS04G0572500 PROTEIN 6 508 - -
Aip02g03246 509 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03246 Aip-Chr2 109241068 109244837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03246 1 508 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 32.197 2.60e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03246 - - ahf:112728865 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03246 02 109241068 109244837 Aip02g03246 02 109241068 109244837 ECH
Aip06g01964 06 81035299 81038456 Aip02g03246 02 109241068 109244837 PCT