Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03243 ATGGGTTCATACAGTGGCACTTGTGAAATAGTTGAAGCAGGGGAAGACATAGATAAAGAGAAAGCTGCAGAGATATATCGATCTAATTCTGGATATAATGCAGCTGAGAAAAACCAGAAGCTTCCTGTGCTGAAACTACAGCATAAGGATCATCTAGATGATGAAATTAATAAGCTGTTTGAGTCAATTACTCTTAAATCTTCATCAAGGGATTGGAGCCTTATACAAGATGGTACCAGCCCTAAGATGAAAAGTACATTAAAAAAGCCAATGACAATGGGTGTTCCTCGGTCGCCACGAGTTGGAGCTTCTGAGCCAGTGACTTTAAAGCAAGCATTAAGGGACATGTGTATATCTAAGGCATCTGAAATGGCTGCTATGAGAAGATTATCAAAGTCATCAGCTTCTCCAAGAATATCTGAGGCTGGAAAGATACATACACTGTACAATTCTGTTGTAGTTGAAGCTAGACGATCAGGGCCTTCTTATGTTGGTAGTAAAGGTAGTAGTACAATGGAGATATCTCTAGAGACAGATGAAAGTAAGTCACTTTCATTGGATACAACTTCCCAGTCTCATTCAAATGCTACAAGCACATCATTGAGCCAAAATGTTCATACTTCTGAAACTGCTGGAACAACTGAACACAATGATACCAGGGATTCATCATCAATGCAAAGTGATTCTGCATCTTCATCATGTAAAGTAGTTGTTCAATCACAGCGTTTGGAACCTGCTCAAGTAGAAAAACAAATATCTGAATCTTCTCCTTCTGGTGATAGCAGTAAGGGAAGTAAATTAGACTTGTGTGAAAACGAGTCATCCCCTAAAAAACTAGGAAACAAAGCATCTGTACCAAAGAAAGGTAAGCTACACTCAGGATCTTCCTCTTCTACCTCAGTAAATGGCAACAGAGTGTGCAAAAAGTCGCGATCCCCTCGAACAGTCAAAATGGTCATCAAGAACAAGGGTTTGGTAAAGAAGAAACTAAAGCAGGGTTCAGGTTCTGCATTATGTGATCCTAGATCCAATGATGCAAATAATAAGCCAGCTCCACTGGTATGTGAAAGATGTTTGTGTGCTATAGAAAACAAAGGTAAAGGAGACAACCAAGACATGGGGTCTATCAGGCCTGGAGAAGGAGTAAACTCAAGTGAGGCGCGGTCAGGCTTGGTTTCGACCAGCTGCAATAGTGGCAGAGAAATTACAGAGGTGAAAAAGAATACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGATTATAGCAGTAGTACCAGTACCAGTGATGAGAGCAATGTCAGTGGCTCTACTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGGTCAAATGCGTCATGGAGTCTTGGGATTGAGACATTTTAATCTTTTGAAGAAACTTGGCTGTGGAGACATTGGGACTGTTTATCTTGCTGAACTGATTGGCACAAATTGCTTGTTTGCTATTAAGGTTATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTCGGGCTCAAACAGAAAGAGAAATATTAAGGATACTGGATCATCCTTTTCTTCCAACAATGTATGCACAGTTTACATCAGATAATCTGGCATGTCTGGTCATGGAGTACTGTCCTGGTGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAATACTTGCACATGCTTGGAATTGTTTACCGTGATTTGAAACCTGAAAACATTCTAGTTAGAGAAGACGGGCACATTATGCTGACAGATTTTGACCTCTCACTGAGGTGTGATGTTAGCCCAACGCTTCTAAAACAATCTTCAGACATGGATCCTGCCAAGGTTTCCGGTCCATGTGTACAATCAAACTGCATCGAGCCATTCTGCATTGAACCGGTGTGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTCCTGCTGCAAAGGCAAGGAAACAGAAAGCTGAACTTGCTGCCCATATCAGATCACTACCACAGCTCGTGGCCGAGCCGACAGACGCAAGATCGAATTCATTTGTAGGCACTCATGAATACTTAGCACCAGAGATCATCAAAGGGGAAGGGCATGGAGCTGCAGTTGATTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTTAAAGGCTCCAACAATGAAGAAACCTTAGCCAATGTGGTTCTGCAGAGTTTAAGGTTCCCTGATACCCCTTTTGTTAGTTTCCAAGCAAGGGACCTTATAAGAGGCTTGTTGGTTAAGGAACCTGAGAATCGTTTGGGTACTGAGAAAGGTGCTGCTGAGATTAAGCAGCATCCCTTCTTTGAAGGTCTTAATTGGGCCTTAATACGCTGTGCTACACCACCAGAAGTACCAGATTTATGTGAGTTTGAGTTCTCAGAGATTACATCACAATCACATGGTAATAAGGGTGGGAAGTATTTAGAGTGTAAAACAACAGGGGAGCAAGTGGAATTTGAATTGTTTTGA 2586 0.4165 MGSYSGTCEIVEAGEDIDKEKAAEIYRSNSGYNAAEKNQKLPVLKLQHKDHLDDEINKLFESITLKSSSRDWSLIQDGTSPKMKSTLKKPMTMGVPRSPRVGASEPVTLKQALRDMCISKASEMAAMRRLSKSSASPRISEAGKIHTLYNSVVVEARRSGPSYVGSKGSSTMEISLETDESKSLSLDTTSQSHSNATSTSLSQNVHTSETAGTTEHNDTRDSSSMQSDSASSSCKVVVQSQRLEPAQVEKQISESSPSGDSSKGSKLDLCENESSPKKLGNKASVPKKGKLHSGSSSSTSVNGNRVCKKSRSPRTVKMVIKNKGLVKKKLKQGSGSALCDPRSNDANNKPAPLVCERCLCAIENKGKGDNQDMGSIRPGEGVNSSEARSGLVSTSCNSGREITEVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSTCGNRPHMSKDVRWEAIRHGQMRHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLACLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKQSSDMDPAKVSGPCVQSNCIEPFCIEPVCQVPCFSPRFLPPAAKARKQKAELAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDTPFVSFQARDLIRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCATPPEVPDLCEFEFSEITSQSHGNKGGKYLECKTTGEQVEFELF 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03243 861 Gene3D Transferase(Phosphotransferase) domain 1 700 825 - -
Aip02g03243 861 PANTHER FLIPPASE KINASE 1-RELATED 1 861 - -
Aip02g03243 861 MobiDBLite consensus disorder prediction 163 265 - -
Aip02g03243 861 MobiDBLite consensus disorder prediction 160 317 - -
Aip02g03243 861 MobiDBLite consensus disorder prediction 386 402 - -
Aip02g03243 861 MobiDBLite consensus disorder prediction 414 448 - -
Aip02g03243 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Aip02g03243 861 Pfam Protein kinase domain 476 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03243 861 Pfam Protein kinase domain 704 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03243 861 MobiDBLite consensus disorder prediction 290 309 - -
Aip02g03243 861 ProSiteProfiles Protein kinase domain profile. 475 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03243 861 MobiDBLite consensus disorder prediction 76 102 - -
Aip02g03243 861 Gene3D Phosphorylase Kinase; domain 1 473 554 - -
Aip02g03243 861 MobiDBLite consensus disorder prediction 369 449 - -
Aip02g03243 861 Gene3D Transferase(Phosphotransferase) domain 1 555 623 - -
Aip02g03243 861 SMART serkin_6 475 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03243 861 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 861 - -
Aip02g03243 861 CDD STKc_phototropin_like 473 826 - -
Aip02g03243 861 SUPERFAMILY Protein kinase-like (PK-like) 453 824 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03243 Aip-Chr2 109193733 109198549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03243 1 861 AGC Kinase Gene Family AT3G52890 52.526 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip02g03243 Pkinase 5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03243 - K08286 gmx:100813470 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01562 06 28121984 28128220 Aip02g03243 02 109193733 109198549 PCT
Aip06g01986 06 84284279 84289307 Aip02g03243 02 109193733 109198549 PCT