Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03233 ATGGCGGAAGAACATCCATGCCAAGCTCCTGAAGGTCACAGGCTCTGTGTCAACAACTGCGGGTTTTTCGGTAGCTCAGCCACCATGAATCTCTGCTCCAAATGCTTCAGAGAACAAGAATCCGCAAAATCTACGATCGAGAACGCTCTCTCCACCGCCACAGCCACCGCAACCTCCTCCGTCGCCGCCTTTCCATCTCCGTCACCGTCCACGTCGTCTTCTCCGGCGCCAACGCCCGCCGTCGAATCCTTTGTTCCTCAACCGGTTGAACTAGAAGCTTCGAGCTCCGTAACGGTTTCTGTAACGGCCAGCTCGAATCCCGGAGCTCCGGTTCAGCCGAACCGTTGCGCTACATGCCGTAAACGAGTCGGGTTGACCGGGTTCAAGTGCAGGTGTGGTGTCACGTTCTGCGGGACCCATAGGTACCCGGAGAAACACGCGTGCGCTTTCGATTTTAAGACGGTGGGAAGAGAAGAGATAGCACGTGCCAACCCCGTGATCAAGGCGGAGAAACTCGATAGGATCTGA 528 0.5625 MAEEHPCQAPEGHRLCVNNCGFFGSSATMNLCSKCFREQESAKSTIENALSTATATATSSVAAFPSPSPSTSSSPAPTPAVESFVPQPVELEASSSVTVSVTASSNPGAPVQPNRCATCRKRVGLTGFKCRCGVTFCGTHRYPEKHACAFDFKTVGREEIARANPVIKAEKLDRI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03233 175 Gene3D - 1 77 - -
Aip02g03233 175 ProSiteProfiles Zinc finger AN1-type profile. 110 156 IPR000058 GO:0008270
Aip02g03233 175 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Aip02g03233 175 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Aip02g03233 175 Pfam AN1-like Zinc finger 116 152 IPR000058 GO:0008270
Aip02g03233 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 44 - -
Aip02g03233 175 Gene3D - 92 171 IPR035896 -
Aip02g03233 175 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 175 - -
Aip02g03233 175 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 175 - -
Aip02g03233 175 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Aip02g03233 175 SMART AN1_Zf_4 116 153 IPR000058 GO:0008270
Aip02g03233 175 MobiDBLite consensus disorder prediction 60 82 - -
Aip02g03233 175 SUPERFAMILY AN1-like Zinc finger 109 170 IPR035896 -
Aip02g03233 175 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03233 Aip-Chr2 109100821 109101348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03233 1 175 C2H2 Transcription Factor Family AT3G52800 49.143 4.77e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03233 - - gmx:100813749 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03233 02 109100821 109101348 Aip02g03233 02 109100821 109101348 ECH