Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03195 ATGGGACGAGTTCGCACAAAAACGGTGAAGAAATCCTCGAGGCAAGTGATCGAGAGGTACTACTCGAAAATGACGCTGGATTTTCACACGAACAAGAAGGTTCTAGAAGAAGTAGCGCTAATCCCATCGAAGAGGCTCCGAAACAAGATCGCAGGGTTCTCAACGCACCTGATGAAGAGGATCCAGAAAGGACCGGTTCGTGGAATCTCGCTGAAGCTGCAGGAAGAGGAGAGAGAGAGGCGCATGGATTTCGTTCCAGAAGTTTCCGCCATTAATGTCGATAGCATCGAGGTCGATAAGCAGACCATCGACATGCTTGCTGCGTTAGTGCCATCAGTGTGTTCTGTGTTGCATTGGGAGAGAATATTTCAATGCTGCACTATTGCATATTGGTGA 396 0.4823 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKVLEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPEVSAINVDSIEVDKQTIDMLAALVPSVCSVLHWERIFQCCTIAYW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03195 131 Pfam Ribosomal S17 1 109 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 PANTHER 40S RIBOSOMAL PROTEIN S17 1 109 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aip02g03195 131 PANTHER 40S RIBOSOMAL PROTEIN S17 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03195 Aip-Chr2 108766096 108768143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03195 1 116 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.833 1.09e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03195 K02962 - rcu:8270486 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03195 02 108766096 108768143 Aip02g03195 02 108766096 108768143 ECH