Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03188 atgaaggaagaaaaggagcattgcgactcatggcatccgacggagGTCGGCCCCAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCTGAGCCCTCAATCATCGCCGCTACCAGAACCAGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTGGCTCTCACTCCCTTCATACTCGGCAAGCGCATATGTACCGACGACGACGCTTCCGCTAAGGACGACGGCGTCTCCGTAGGGTCCTTAGTGGGCCCCAGAGCTCCCGCGGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTTGGTCAAATTTGGAGTTTCGCAGCGGCTGCTCCTCCGCTGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAACAGCAACAAGCTTCTTTGTTCGTTCACCATCGGCATCAGCAGCAACAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGTTGGGAAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCTAAGTTGGGAGGGCCCGAAAAATTTTAG 609 0.555 MKEEKEHCDSWHPTEVGPKSDGQTIEWLLRQAEPSIIAATRTRTTPASFSSISVSVRGGAGSLSSPSSTSAASSLDHKPLLALTPFILGKRICTDDDASAKDDGVSVGSLVGPRAPAGLWALPARPDFGQIWSFAAAAPPLEMVVQSAAVSVSQQQQASLFVHHRHQQQQQAMGEASAARLGNYLPGHLNLLASKLGGPEKF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03188 202 Pfam TCP family transcription factor 17 96 IPR017887 -
Aip02g03188 202 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 199 IPR005333 GO:0003700
Aip02g03188 202 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 15 199 - -
Aip02g03188 202 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03188 Aip-Chr2 108710704 108711312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03188 15 198 TCP Transcription Factor Family AT5G23280 59.574 6.42e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip02g03188 TCP 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03188 K16221 - gmx:100799005 231.106